DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-kappa and kirrel3a

DIOPT Version :9

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:XP_700618.5 Gene:kirrel3a / 571887 ZFINID:ZDB-GENE-091117-44 Length:774 Species:Danio rerio


Alignment Length:609 Identity:127/609 - (20%)
Similarity:208/609 - (34%) Gaps:145/609 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 FAEPIANVTVSVGRDALMACVVENLKGYKVAWVR----VDTQTILSIH--HNVISQNSRISLTYN 134
            |.:...::.:..|....:.|.:...:| .|.||:    :.....||.:  ::||..:|:      
Zfish    23 FIQQPHDLVIVAGEPVTLPCTIIGYQG-MVLWVKDGLALGVNRDLSGYPRYDVIGDHSK------ 80

  Fly   135 DHRSWYLHIKEVEETDRGWYMCQVNTDPMRSRKGYLQVVVPP----IIVEGLTSNDMVVREGQNI 195
              ..::|.|:..|..|.|.:.||......|||...|.|:|||    ||...:.|    :|.|.::
Zfish    81 --GEYHLLIERTELVDDGSFECQAIQVAGRSRPAQLTVLVPPDDPVIIGAPVVS----LRAGDSL 139

  Fly   196 SLVCKA-RGYPEPYVMWRREDGEEMLIGGEHVNVV--DGELLHITKVSRLHMAA--------YLC 249
            :|.|.| ...|...::|.|..  |::.|..:...:  ||:  ..:.||.||::|        ..|
Zfish   140 NLTCHANNAKPAASIIWIRNG--EVINGAAYTKTLLRDGK--RESTVSTLHISASNIESGQQITC 200

  Fly   250 VASNGVPPSISK-RVHLRVQFPPMLSIPNQLEGAYLGQDVILECHTEAYPASINYWTTERGDMII 313
            .|||...|:..: .|.:.:|..|::::..:.:....|..|...|..:|.|...:|...:.|.|| 
Zfish   201 RASNKAAPNGKEATVTIDIQHFPLVNLSVEPQPVLEGNLVKFHCAAKANPPVTHYRWAKGGSMI- 264

  Fly   314 SDTSRAGDKYETTSTVSGYTKYMKLKIRAVGPNDFGTYRCVAKNSLGETDGNIKLDEMPTPTTAI 378
              |...||.||.....|.:|:.:.               |...|:||.|:.:..:|....|..|.
Zfish   265 --TDATGDTYEVLVDHSFFTEPVS---------------CEVTNALGSTNISRNVDVYFGPRLAA 312

  Fly   379 ISEMSLLNRSYDG-----------------KRRHRNKFDSANALPDYGVEEWRDG-----AQGNN 421
            ..:...::|..|.                 ||.|.....:.|.|....|.:...|     |....
Zfish   313 EPQSLQVDRGSDAVFSCAWIGNPSLTIVWMKRGHGVVLSNENTLTLKAVRQEDAGKYVCRAVVPR 377

  Fly   422 AGNNGDNNQTPVRNPPGAFHNSAGSLAQHNLLAKIMLGIKTQSFGIFKRLSSSLPLAAGQSFLWL 486
            .|.........|..||     |..|......|    .|.|    |..|....|.|.....::.|.
Zfish   378 VGVGEKEVMLTVNGPP-----SISSTQTQQAL----YGEK----GQIKCFIRSTPPPDRIAWSWK 429

  Fly   487 STLSLVSAPSRWRMSNVENRPNSPETVVNNDTAAECWETRSHCVSESNNNNNSRITQRPPMWARH 551
            .|:.......|:.:..|........|:...:.....::|..:|.:                |   
Zfish   430 ETVLESGTSGRYTVETVSTEEGVISTLTMRNIVPTDFQTIYNCTA----------------W--- 475

  Fly   552 LRIFHIAHTPCGASTQYQRLCERQWQWQRLWQWQCQWKWQHQWQWPMLICIVILAGCFVRWLPML 616
                    ...|:.|:..||.|                   |....:.:.|.:..|.|:    .|
Zfish   476 --------NSFGSDTEIIRLKE-------------------QGSLRLAVIIGVAVGAFL----AL 509

  Fly   617 LHFIGRHIGTFSISATHRQ--HLM 638
            :..||. :|.|..:...|:  ||:
Zfish   510 IVLIGT-LGAFCCARLQRKDMHLV 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 Ig 80..172 CDD:299845 22/97 (23%)
IG_like 82..174 CDD:214653 23/97 (24%)
IG_like 184..267 CDD:214653 24/94 (26%)
IGc2 191..255 CDD:197706 20/74 (27%)
IG_like 282..368 CDD:214653 21/85 (25%)
Ig 288..367 CDD:143165 20/78 (26%)
kirrel3aXP_700618.5 Ig 25..116 CDD:299845 22/99 (22%)
IG_like 27..116 CDD:214653 22/97 (23%)
I-set 123..217 CDD:254352 26/101 (26%)
Ig2_KIRREL3-like 139..219 CDD:143236 21/83 (25%)
Ig_2 227..304 CDD:290606 21/94 (22%)
I-set 308..389 CDD:254352 13/80 (16%)
IGc2 322..373 CDD:197706 8/50 (16%)
Ig5_KIRREL3 391..488 CDD:143306 22/136 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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