DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-kappa and igsf9bb

DIOPT Version :9

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:XP_009293693.1 Gene:igsf9bb / 569554 ZFINID:ZDB-GENE-091112-15 Length:1439 Species:Danio rerio


Alignment Length:570 Identity:137/570 - (24%)
Similarity:204/570 - (35%) Gaps:157/570 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 TRLDTQQTAQEDSDFPRFAEPIANVTVSVGRDALMACVVENLKG--YKVAWVRVDTQTILSIH-- 119
            ||....|.|....:.|:|....|..||.:|.|     ||..|.|  |.|.|.:........|:  
Zfish    15 TRGTAAQGAHGVREEPQFVTSRAGETVILGCD-----VVHPLNGQPYVVEWFKFGVPIPFFINFR 74

  Fly   120 ----HNVISQNSRISLTYNDHRSWYLHIKEVEETDRGWYMCQVNTDPMRSRKGY----------L 170
                |.......|.||    |....|.|:.|...|:|||.|:|    :...:.|          |
Zfish    75 FYPPHVDPEYAGRASL----HGKSSLRIERVRSEDQGWYECKV----LMLEQQYHTFHNGSWVHL 131

  Fly   171 QVVVPPIIVEGLTSNDMV-VREGQNISLVCKARGYPEPYVMWRREDGEEMLIGGEHVNVVDGELL 234
            .|..||...:  |....| .:||.:|:|.|.|.|.|:|.|.|.|| |..:....:: .|.||.|.
Zfish   132 TVNAPPTFTD--TPPQYVEAKEGGSITLSCTAFGNPKPSVSWLRE-GNPVQDSTKY-KVSDGSLT 192

  Fly   235 HITKVSRLHMAAYLCVASNGVPPSISKRVH---LRVQFPPMLSIPNQLEGAYLGQDVILECHTEA 296
             :..:||....||.|.|.:    ...:.||   |.||.||.:..|.:.....:.||....|..||
Zfish   193 -LVSISREDRGAYTCRAYS----EQGEAVHTTRLLVQGPPFIVSPPENITVNISQDAFFTCQAEA 252

  Fly   297 YPASINY-WTTERGDMIISDTSRAGDKYETTSTVSGYTKYMKLKIRAVGPNDFGTYRCVAKNSLG 360
            ||.::.| |..|..::...:..    |...:..:.|     .|.|..|.|.|.|.|.|...||||
Zfish   253 YPGNLTYTWFWEEDNVFFKNDL----KRRVSILIDG-----SLIISQVKPEDAGKYTCSPSNSLG 308

  Fly   361 E----------------------------TDGNIK--LDEMPTPTTAIISEMSLLNRSYDGKRRH 395
            .                            ..|.|:  :|..| |.|::       ....||....
Zfish   309 RPPSASAYLTVHYPARVINMPPVIYVAIGLPGYIRCPVDANP-PVTSV-------KWKKDGLPLR 365

  Fly   396 RNKFDSANALPD--YGVEEWRDGAQG-------NNAGNNGDNNQTP--VRNPP-------GAFHN 442
            ..|:...:.:.|  ..|.|..:.:.|       |:.|..|.:...|  :::||       |.:..
Zfish   366 IEKYPGWSQMEDGSIRVSEVTEDSLGTYTCVPYNSLGTMGPSPPAPLVLKDPPKFLVVPGGEYRQ 430

  Fly   443 SAG--------------------------SLAQHNLLAKIMLGIKT---QSFGIFKRLSSSLPLA 478
            .||                          |.::||:|.:..|..|:   :..|.::.::|::..:
Zfish   431 EAGRELVIPCEAEGDPFPNITWRKKVGKPSRSKHNVLPRGSLQFKSLSKEDHGEWECVASNVATS 495

  Fly   479 AGQSFLWLSTLSLVSAPSRWRMSNVENRPNSPETV---VNNDTAAECWET 525
                 :..||..||...|          |::|..|   |:..:|...|::
Zfish   496 -----ITASTHLLVIGTS----------PHAPAKVHVTVSTTSANVSWDS 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 Ig 80..172 CDD:299845 29/109 (27%)
IG_like 82..174 CDD:214653 29/109 (27%)
IG_like 184..267 CDD:214653 28/86 (33%)
IGc2 191..255 CDD:197706 24/63 (38%)
IG_like 282..368 CDD:214653 26/116 (22%)
Ig 288..367 CDD:143165 23/107 (21%)
igsf9bbXP_009293693.1 IG_like 30..113 CDD:214653 28/91 (31%)
Ig 41..113 CDD:143165 24/80 (30%)
IG_like 144..223 CDD:214653 28/85 (33%)
IGc2 151..208 CDD:197706 23/59 (39%)
I-set 227..319 CDD:254352 26/100 (26%)
Ig <263..319 CDD:299845 15/64 (23%)
Ig_2 326..414 CDD:290606 17/95 (18%)
IG_like 329..403 CDD:214653 14/81 (17%)
IG_like 424..504 CDD:214653 13/84 (15%)
Ig 440..504 CDD:299845 10/68 (15%)
FN3 509..604 CDD:238020 6/22 (27%)
FN3 620..704 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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