DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-kappa and igsf9a

DIOPT Version :9

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:XP_005155702.1 Gene:igsf9a / 557459 ZFINID:ZDB-GENE-060503-288 Length:1619 Species:Danio rerio


Alignment Length:526 Identity:127/526 - (24%)
Similarity:195/526 - (37%) Gaps:111/526 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 YKVAWVR--VDTQTI--LSIHHNV-ISQNSRISLTYNDHRSWYLHIKEVEETDRGWYMCQV---- 158
            |.:.|||  .||...  |.:|..| ...:.|:||    .....|.:..::..|.|||.|::    
Zfish    55 YVIEWVRQGFDTPIFMQLGVHPRVHPDYDGRVSL----FGGTSLQMSGLQLEDEGWYECRILPLD 115

  Fly   159 -NTDPMRSRKGY--LQVVVPPIIVEGLTSNDMVVREGQNISLVCKARGYPEPYVMWRREDGEEML 220
             .|:...|...:  |.|..||::.| .:..::.|..|::::|.|.|:|.|.|.:.|.: ||..  
Zfish   116 QTTEEAGSSGSWTRLSVTAPPVLTE-TSPPEVEVFVGRSLTLKCAAQGNPRPTITWSK-DGAP-- 176

  Fly   221 IGGEH-VNVVDGEL-LHITKVSRLHMAAYLCVASNGVPPSISKRVH---LRVQFPPMLSIPNQLE 280
            |..:| |.:|:|.: .|  .|||.....|.|..||    |.....|   |::..||::.||....
Zfish   177 IKPQHKVKMVNGSVSFH--AVSREAAGQYQCYTSN----SEGNATHVTRLKIIGPPVIIIPPSDT 235

  Fly   281 GAYLGQDVILECHTEAYPASINY-WTTERGDMIISDTSRAGDKYETTSTVSGYTKYMKLKIRAVG 344
            ...:.||..|:|..||.|.::.| |..:..|:...|:.::..|.....|         |.|..:.
Zfish   236 VLNMSQDAKLKCQAEADPPNMTYVWQRQGVDIYHIDSLKSRIKVIVDGT---------LLISRLA 291

  Fly   345 PNDFGTYRCVAKNSL---------------GETDGNIKLDEMPTPTTAII-------SEMSLLNR 387
            |.|.|.|.|:..|.|               .:.....||..:||.....|       ..:|.::.
Zfish   292 PEDSGNYTCMPTNGLPVSPSASAVLTVQHPAQVIQMPKLTFLPTGMRGAIVCPVRAEPPLSHIDW 356

  Fly   388 SYDGKRRHRNKFDSANALPDYG--VEEWRDGAQG-------NNAGNNGDNNQTPV--RNPP---- 437
            ..|||......:.......|..  :....|.|.|       |:.|..|.:..|.|  ::||    
Zfish   357 IKDGKPLDLGMYPGWTLASDGSIVIATVNDDAAGVYICTPYNSFGTTGQSEPTTVILQDPPSFKV 421

  Fly   438 ---GAFHNSAGSLAQHNLLAKIMLG-----IKTQSFGIFKRLSSSLPLAAGQSFLWLSTLSLVSA 494
               ..:....|::.   ::...|:|     :..:..|...|   ||...||...|.|..|| ...
Zfish   422 SPRNEYRQDVGTML---VIPCQMVGNPAPKVNWRKIGAATR---SLFTLAGNGSLILHPLS-KDH 479

  Fly   495 PSRWRMSNVENRPNSPETVVNNDTAAECWETRSHCVSE------SNNNNNSRI-------TQRPP 546
            ...|..|: .||    ...|:..|......|..|.||.      :|..|.|.:       ||...
Zfish   480 QGEWECSS-SNR----VATVSIKTMVLVLGTSPHAVSSVSVIPGTNQANVSWVAGFDGGYTQTFT 539

  Fly   547 MWARHL 552
            :|.:.:
Zfish   540 VWYKQV 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 Ig 80..172 CDD:299845 21/80 (26%)
IG_like 82..174 CDD:214653 22/82 (27%)
IG_like 184..267 CDD:214653 27/87 (31%)
IGc2 191..255 CDD:197706 23/65 (35%)
IG_like 282..368 CDD:214653 22/101 (22%)
Ig 288..367 CDD:143165 20/94 (21%)
igsf9aXP_005155702.1 IG_like 27..110 CDD:214653 17/58 (29%)
Ig 35..111 CDD:299845 18/59 (31%)
I-set 140..221 CDD:254352 27/90 (30%)
IGc2 151..212 CDD:197706 24/69 (35%)
Ig 233..318 CDD:299845 22/93 (24%)
I-set 233..318 CDD:254352 22/93 (24%)
Ig <349..402 CDD:299845 9/52 (17%)
IG_like 423..502 CDD:214653 19/90 (21%)
Ig 435..498 CDD:143165 17/74 (23%)
FN3 507..602 CDD:238020 9/39 (23%)
fn3 614..696 CDD:278470
PHA02666 1105..>1312 CDD:222914
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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