DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-kappa and NCAM2

DIOPT Version :9

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:XP_011527877.1 Gene:NCAM2 / 4685 HGNCID:7657 Length:874 Species:Homo sapiens


Alignment Length:492 Identity:104/492 - (21%)
Similarity:181/492 - (36%) Gaps:137/492 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 RFRLQAEFNVRQLAITIIATAAVTMLMTATPTLAEIPSKGKHTRLDTQQTAQEDSDFPRFAEPIA 81
            |...:.|.:.|.:.:.:....|::|           |.|.                        .
Human   214 RVEARGEIDFRDIIVIVNVPPAISM-----------PQKS------------------------F 243

  Fly    82 NVTVSVGRDALMACVVENLKGYKVAWVRVDTQTILSIHHNVISQNSRISLTYNDHRSWYLHIKEV 146
            |.|...|.:...:|.........::|.|         :..:|.:|.:..|..::..   |.::.:
Human   244 NATAERGEEMTFSCRASGSPEPAISWFR---------NGKLIEENEKYILKGSNTE---LTVRNI 296

  Fly   147 EETDRGWYMCQ-VNTDPMRSRKGYLQVVVPPIIVEGLTSNDMVVREGQNISLVCKARGYPEPYVM 210
            ..:|.|.|:|: .|......::.:|||.|.|.|::  ..|:.....|| ::|||.|.|.|.|.:.
Human   297 INSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQ--LKNETTYENGQ-VTLVCDAEGEPIPEIT 358

  Fly   211 WRR-------EDGEEMLIG-----GEHVNVVDGELLHITKVSRLHMAAYLCVASNGVPPSISKRV 263
            |:|       .:|::.|.|     |:|    ....|||..|.......|.|.|::.: ....|.:
Human   359 WKRAVDGFTFTEGDKSLDGRIEVKGQH----GSSSLHIKDVKLSDSGRYDCEAASRI-GGHQKSM 418

  Fly   264 HLRVQFPPMLSIPNQ-LEGAYLGQDVILECHTEAYPASINYWTTERGDMIISDTSRAGDKYETTS 327
            :|.:::.|.. |.|| :..::.|..:.:.|..::.|.:..:|   |.|.::...       :.|:
Human   419 YLDIEYAPKF-ISNQTIYYSWEGNPINISCDVKSNPPASIHW---RRDKLVLPA-------KNTT 472

  Fly   328 TVSGYT--KYMKLKIRAVGPNDFGTYRCVAKNSLG--------------ETDGNIKLDEMPTPTT 376
            .:..|:  :.|.|:|.....||||.|.|.|.|.:|              .:...:|:.|: :.||
Human   473 NLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIGTRFQEYILALADVPSSPYGVKIIEL-SQTT 536

  Fly   377 AIISEMSLLNR--SYDGKRRHRNKFDSANALPDYGVEEWR----DGAQGNNAGNNGDNNQT---- 431
            |.:|    .|:  |:.|...|..:.|    :.:...|.|:    .|.|.....||.:.|.|    
Human   537 AKVS----FNKPDSHGGVPIHHYQVD----VKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIR 593

  Fly   432 ---------------------PVRNP-PGAFHNSAGS 446
                                 |||.| |.:.|....|
Human   594 VAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQPSS 630

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 Ig 80..172 CDD:299845 16/92 (17%)
IG_like 82..174 CDD:214653 18/92 (20%)
IG_like 184..267 CDD:214653 26/94 (28%)
IGc2 191..255 CDD:197706 23/75 (31%)
IG_like 282..368 CDD:214653 20/101 (20%)
Ig 288..367 CDD:143165 19/94 (20%)
NCAM2XP_011527877.1 Ig1_NCAM-2 46..137 CDD:143274
I-set 47..136 CDD:254352
I-set 142..218 CDD:254352 1/3 (33%)
IGc2 153..214 CDD:197706 104/492 (21%)
Ig 233..326 CDD:299845 22/139 (16%)
I-set 240..323 CDD:254352 17/118 (14%)
Ig5_NCAM-2 325..422 CDD:143278 29/104 (28%)
IG_like 333..420 CDD:214653 25/92 (27%)
IG_like 438..515 CDD:214653 20/86 (23%)
IGc2 439..507 CDD:197706 19/77 (25%)
FN3 521..613 CDD:238020 19/100 (19%)
fn3 619..703 CDD:278470 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.910

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