DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-kappa and CG13506

DIOPT Version :10

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_611666.2 Gene:CG13506 / 37556 FlyBaseID:FBgn0034723 Length:503 Species:Drosophila melanogaster


Alignment Length:332 Identity:73/332 - (21%)
Similarity:128/332 - (38%) Gaps:33/332 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LDTQQTAQEDSDFPRFAEPIANVTVSVGRDALMACVVENLK-GYKVAWVRVDTQTILSIHHNVIS 124
            :|..:...|....|.|......|....|.|.::.|...|.: ...|.|.:  .:.|::...|.||
  Fly    57 IDVTKNHAEQEAPPYFDVTDLRVEAKPGDDVILNCDARNFQLSNAVVWYK--NRIIIANGQNPIS 119

  Fly   125 QNSRISLTYNDHRSWYLHIKEVEETDRGWYMCQVNTDPMRSRKGYLQVVVPPIIV---EGLTSND 186
            |  |:....|:.    :.::.|...|...|.|::....:|.... |:|.....|:   ..:|...
  Fly   120 Q--RVQCMLNNS----ILLRNVSPEDSDDYYCEILPQRVRQHTA-LRVGARLSILCDDRDITDRS 177

  Fly   187 MVVREGQNISLVCKARGYPEPYVMWRREDGEEMLIGGEHVNVVDGE--LLHITKVSRLHMAAYLC 249
            ...|:|.:..|.|:........:.|...|     :.|: .:.||.:  ::.:..|...:...|.|
  Fly   178 QTFRQGDHHKLECRTYLPDNATIKWSFND-----LNGQ-PSSVDNQNGVIILDNVDEKNAGDYQC 236

  Fly   250 VASNGV--PPSISKRVHLRVQFPPMLSIPNQLEGAYLGQDVILECHTEAYPASINYWTTERGDMI 312
            :|.:|.  ||  ...||:.||:.|::|..........|....|.|:..|.|...:|:..:     
  Fly   237 LADDGSRHPP--HGTVHIDVQYSPIVSTHRHNVNTEKGATAELYCNYRAKPIGRSYFIKD----- 294

  Fly   313 ISDTSRAGDKYETTSTVSGYTKYMKLKIRAVGPNDFGTYRCVAKNSLGETDGNIKLDEMPTPTTA 377
             ..|.:..|||....:|........|.:|.|..:|.|.|.|..:|::|..:  :|:.....|.|.
  Fly   295 -GKTLQLSDKYSLKDSVHNDHNRTTLIVREVTDSDLGEYLCQVENAIGSNE--VKVHVSYNPETP 356

  Fly   378 IISEMSL 384
            ...:|::
  Fly   357 QFEDMTV 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 IG_like 82..174 CDD:214653 21/92 (23%)
Ig strand B 91..95 CDD:409353 0/3 (0%)
Ig strand C 104..108 CDD:409353 1/3 (33%)
Ig strand E 139..143 CDD:409353 0/3 (0%)
Ig strand F 153..158 CDD:409353 2/4 (50%)
Ig strand G 165..168 CDD:409353 0/2 (0%)
Ig 176..267 CDD:472250 20/97 (21%)
Ig strand B 195..199 CDD:409301 1/3 (33%)
Ig strand C 208..212 CDD:409301 0/3 (0%)
Ig strand E 232..236 CDD:409301 0/5 (0%)
Ig strand F 246..251 CDD:409301 2/4 (50%)
Ig strand G 260..263 CDD:409301 0/2 (0%)
IG_like 282..368 CDD:214653 20/85 (24%)
Ig strand B 288..292 CDD:409353 1/3 (33%)
Ig strand C 301..305 CDD:409353 1/3 (33%)
Ig strand E 330..340 CDD:409353 1/9 (11%)
Ig strand F 350..355 CDD:409353 2/4 (50%)
Ig strand G 363..366 CDD:409353 0/2 (0%)
CG13506NP_611666.2 Ig_3 69..146 CDD:464046 19/84 (23%)
Ig_3 173..238 CDD:464046 13/70 (19%)
Ig 258..349 CDD:472250 23/98 (23%)
Ig strand B 275..279 CDD:409353 1/3 (33%)
Ig strand C 288..292 CDD:409353 1/3 (33%)
Ig strand E 317..321 CDD:409353 1/3 (33%)
Ig strand F 331..336 CDD:409353 2/4 (50%)

Return to query results.
Submit another query.