DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-kappa and Sdk2

DIOPT Version :9

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:XP_006247755.1 Gene:Sdk2 / 360652 RGDID:1310397 Length:2175 Species:Rattus norvegicus


Alignment Length:631 Identity:126/631 - (19%)
Similarity:207/631 - (32%) Gaps:211/631 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QLAITIIATAAVTMLMTATPTLAEIPSKGKHTRLDTQQTAQ------EDSDFPRFAEPIA----- 81
            ::|||:..|  :.:|.|..|.......:..:.:....:|:|      |:...|  |:|||     
  Rat   162 RIAITLENT--LVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGP--ADPIAPTIII 222

  Fly    82 ---NVTVSVG-RDALMACVVENLKGYKVAWVRVDTQTILSIHHNVISQNSRISLTYNDHRSWYLH 142
               |.:|..| .:..|.||.......|:..|......:||  :.:...|.|:::|          
  Rat   223 PPKNTSVVAGTSEVTMECVANARPLIKLHIVWKKDGALLS--NGISDYNRRLTIT---------- 275

  Fly   143 IKEVEETDRGWYMCQV-----NTDPMRSRKGYLQVVVPPIIVEGLTSNDMVVREGQN-------- 194
              ....:|.|:|.|:.     :..|: :|..||.|:.||          ..|||.:.        
  Rat   276 --NPMVSDAGYYECEAMLRSSSVAPV-TRGAYLSVLEPP----------QFVREPERHITAEMEK 327

  Fly   195 -ISLVCKARGYPEPYVMWRREDGEEMLIGGEHVNVVDGELLHITKVSRL---------------- 242
             :.:.|:|:|.|.|.:.|.:                |..|:.:.|::|.                
  Rat   328 VVDIPCRAKGVPPPSITWYK----------------DAALVEVGKLTRFKQRSDGGLQISGLLPD 376

  Fly   243 ---------HMAA-------YLCVASNGVPPSISKRVHLRVQFPPMLSIPNQLEGAYL-GQDVIL 290
                     |.||       ||.|.|  :.|:|::               ..|:...: |..|:|
  Rat   377 DTGMVQCFAHNAAGEAQTSTYLAVTS--IAPNITR---------------GPLDSTVIDGMSVVL 424

  Fly   291 ECHTEAYPASINYWTTERGDMIISDTSRAGDKYETTSTVSGYTKYMKLKIRAVGPNDFGTYRCVA 355
            .|.|...|.....|  ::|:.|::..|....::  |...||     .|.|.....:|.|||.|:|
  Rat   425 ACETSGAPRPAITW--QKGERILASGSVQLPRF--TLLESG-----SLLISPTHISDAGTYTCLA 480

  Fly   356 KNSLGETDGNIKL-------------DEM----------------PTPTTAIISEMSLLNRSYDG 391
            .||.|..:.:..|             |:.                |..|...:.|.       ||
  Rat   481 TNSRGVDEASADLVVWARTRITKPPQDQSVIKGTQASMVCGVTHDPRVTVRYVWEK-------DG 538

  Fly   392 -----KRRHRNKFDSANAL-------PDYGVEEWRDGAQGNNAGNNGDNNQTPVRNPPGAFHNSA 444
                 :...|.:.|...:|       .|.|....|..:.|   ||:..|....||..|.|..:..
  Rat   539 ATLAVETNPRIRLDRNGSLHISQTWSGDIGTYTCRVLSAG---GNDSRNAHLRVRQLPHAPEHPV 600

  Fly   445 GSLAQHNLLAKIMLGIKTQSFGIFKRLSSSLPLAA---GQSFLWLSTLSLVSAPSRWRMSNVENR 506
            .:|:                  ..:|.:.:|..|.   |.|.|....|.:....:.|.:......
  Rat   601 ATLS------------------TMERRAINLTWAKPFDGNSPLMRYILEMSENNAPWTILLASVD 647

  Fly   507 PNSPETVVNNDTAAECWETRSHCVSESNNNNNSRITQR------PP 546
            |.:...:|.....|..::.|...|::......|:.|:|      ||
  Rat   648 PEATSVMVKGLVPARSYQFRLCAVNDVGKGQFSKDTERVSLPEEPP 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 Ig 80..172 CDD:299845 23/105 (22%)
IG_like 82..174 CDD:214653 22/97 (23%)
IG_like 184..267 CDD:214653 22/123 (18%)
IGc2 191..255 CDD:197706 18/104 (17%)
IG_like 282..368 CDD:214653 24/86 (28%)
Ig 288..367 CDD:143165 23/78 (29%)
Sdk2XP_006247755.1 IG_like 43..112 CDD:214653
IGc2 43..101 CDD:197706
IG_like 123..206 CDD:214653 9/45 (20%)
Ig 135..191 CDD:299845 7/30 (23%)
IG_like 225..307 CDD:214653 21/96 (22%)
IGc2 236..289 CDD:197706 14/66 (21%)
I-set 311..400 CDD:254352 19/114 (17%)
Ig 329..397 CDD:143165 13/83 (16%)
I-set 405..495 CDD:254352 28/113 (25%)
Ig 419..495 CDD:299845 25/84 (30%)
Ig 505..589 CDD:299845 16/93 (17%)
IG_like 505..589 CDD:214653 16/93 (17%)
FN3 593..684 CDD:238020 17/108 (16%)
FN3 696..789 CDD:238020
FN3 797..893 CDD:238020
FN3 898..986 CDD:238020
FN3 996..1090 CDD:238020
FN3 1102..1197 CDD:238020
FN3 1204..1293 CDD:238020
FN3 1304..1397 CDD:238020
FN3 1403..1487 CDD:238020
FN3 1506..1619 CDD:238020
FN3 1629..1722 CDD:238020
FN3 1727..1808 CDD:238020
FN3 1840..1919 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3510
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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