Protein Alignment DIP-kappa and Lsamp

DIOPT Version :10

• Sequence 1: NP_723828.1
• Gene: DIP-kappa / 318958
• FlyBaseID: FBgn0051814
• Length: 672
• Species: Drosophila melanogaster
• Sequence 2: NP_001401926.1
• Gene: Lsamp / 29561
• RGDID: 71102
• Length: 378
• Species: Rattus norvegicus
• Alignment Length: 313
• Identity: 105/313 - (33%)
• Similarity: 149/313 - (47%)
• Gaps: 42/313 - (13%)

  Fly    72 DFPRFAEPIANVTVSVGRDALMACVVENLKGYKVAWVRVDTQTILSIHHNVISQNSRISLTYNDH 136
            ||.|..:   |:||..|..|::.||||: |..||||  ::...|:...|:..|.:.|:.|.....
  Rat    50 DFNRGTD---NITVRQGDTAILRCVVED-KNSKVAW--LNRSGIIFAGHDKWSLDPRVELEKRHA 108

  Fly   137 RSWYLHIKEVEETDRGWYMCQVNT--DPMRSRKGYLQVVVPPIIVEGLTSNDMVVREGQNISLVC 199
            ..:.|.|::|:..|.|.|.|.|.|  :|..|:. ||.|.|||.|..  .|:|:.|.||.|::|||
  Rat   109 LEYSLRIQKVDVYDEGSYTCSVQTQHEPKTSQV-YLIVQVPPKISN--ISSDVTVNEGSNVTLVC 170

  Fly   200 KARGYPEPYVMWR------RE-DGEEMLIGGEHVNVVDGELLHITKVSRLHMAAYLCVASNGVPP 257
            .|.|.|||.:.||      || :|||             |.|.|..::|.....|.|.|:|.|..
  Rat   171 MANGRPEPVITWRHLTPLGREFEGEE-------------EYLEILGITREQSGKYECKAANEVSS 222

  Fly   258 SISKRVHLRVQFPPMLSIPNQLEGAYLGQDVILECHTEAYPASINYWTTERGDMIISDTSRAGDK 322
            :..|:|.:.|.:||.::.....| |..|:...|:|...|.||....|  .|.|..|:  |..|.:
  Rat   223 ADVKQVKVTVNYPPTITESKSNE-ATTGRQASLKCEASAVPAPDFEW--YRDDTRIN--SANGLE 282

  Fly   323 YETTSTVSGYTKYMKLKIRAVGPNDFGTYRCVAKNSLGETDGNIKLDEMPTPT 375
            .::|...|..|      :..|....:|.|.|||.|.||.|:.::.|.:...||
  Rat   283 IKSTEGQSSLT------VTNVTEEHYGNYTCVAANKLGVTNASLVLFKRVLPT 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
DIP-kappa	NP_723828.1	IG_like	82..174	CDD:214653	33/93 (35%)
		Ig strand B	91..95	CDD:409353	1/3 (33%)
		Ig strand C	104..108	CDD:409353	3/3 (100%)
		Ig strand E	139..143	CDD:409353	1/3 (33%)
		Ig strand F	153..158	CDD:409353	2/4 (50%)
		Ig strand G	165..168	CDD:409353	1/2 (50%)
		Ig	176..267	CDD:472250	34/97 (35%)
		Ig strand B	195..199	CDD:409301	1/3 (33%)
		Ig strand C	208..212	CDD:409301	0/3 (0%)
		Ig strand E	232..236	CDD:409301	2/3 (67%)
		Ig strand F	246..251	CDD:409301	2/4 (50%)
		Ig strand G	260..263	CDD:409301	1/2 (50%)
		IG_like	282..368	CDD:214653	26/85 (31%)
		Ig strand B	288..292	CDD:409353	1/3 (33%)
		Ig strand C	301..305	CDD:409353	0/3 (0%)
		Ig strand E	330..340	CDD:409353	2/9 (22%)
		Ig strand F	350..355	CDD:409353	2/4 (50%)
		Ig strand G	363..366	CDD:409353	0/2 (0%)
Lsamp	NP_001401926.1	Ig	55..145	CDD:472250	32/96 (33%)
		Ig strand B	66..70	CDD:409382	1/3 (33%)
		Ig strand C	78..82	CDD:409382	4/5 (80%)
		Ig strand E	111..115	CDD:409382	1/3 (33%)
		Ig strand F	125..130	CDD:409382	2/4 (50%)
		Ig strand G	138..141	CDD:409382	1/2 (50%)
		Ig_3	148..218	CDD:464046	31/84 (37%)
		Ig_3	235..311	CDD:464046	25/86 (29%)