DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-kappa and Ermap

DIOPT Version :9

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:XP_006503201.1 Gene:Ermap / 27028 MGIID:1349816 Length:626 Species:Mus musculus


Alignment Length:122 Identity:41/122 - (33%)
Similarity:57/122 - (46%) Gaps:20/122 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 RISLTYNDHR-SWYLHIKEVEETDRGWYMCQV---NTDPMRSRKGYLQVVV----PPIIVEGLTS 184
            |.:|..:.|: |:.|.|..|...|||.|.|||   |:.  |.....|||.|    |.|.|:|.  
Mouse   140 RTALVRDAHKESYILQISNVRLEDRGLYQCQVWVGNSS--REDNVTLQVA
VLGSDPYIHVKGY-- 200

  Fly   185 NDMVVREGQNISLVCKARG-YPEPYVMWRREDGEEMLIGGEHVNVVDGELLHITKVS 240
                  :...|.|:|::.| :|:|:..||...|..:|...| |:.:|...|..|.||
Mouse   201 ------DAGWIELLCQSVGWFPKPWTEWRDTTGRALLSLSE-VHSLDENGLFRTAVS 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 Ig 80..172 CDD:299845 17/47 (36%)
IG_like 82..174 CDD:214653 19/49 (39%)
IG_like 184..267 CDD:214653 17/58 (29%)
IGc2 191..255 CDD:197706 17/51 (33%)
IG_like 282..368 CDD:214653
Ig 288..367 CDD:143165
ErmapXP_006503201.1 Ig 87..187 CDD:386229 18/48 (38%)
SPRY 381..563 CDD:383051
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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