DRSC/TRiP Functional Genomics Resources

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Protein Alignment DIP-kappa and Cntn4

DIOPT Version :9

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_001103219.1 Gene:Cntn4 / 269784 MGIID:1095737 Length:1026 Species:Mus musculus


Alignment Length:612 Identity:127/612 - (20%)
Similarity:204/612 - (33%) Gaps:152/612 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GPHRLPRPHTRRRFRLQAEFNVR---QLAITIIATAAVTM------LMTATPTLAEIPSKGKH-T 59
            ||   |.|...|...:..|:..:   |...|:.|....|:      |....||:....:.||. .
Mouse   207 GP---PTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIA 268

  Fly    60 RLDTQQTAQEDSDFPRFAEPIANVTVSVGRDALMACVVENLKGYKVA-----------WVRVDTQ 113
            |...:..:....:.|.|.:..|         ....||.||.:|..||           ||::...
Mouse   269 RKARRHKSNGILEIPNFQQEDA---------GSYECVAENSRGKNVAKGQLTFYAQPNWVQIIND 324

  Fly   114 TILSIHHNVI---SQNSRISLTYNDHRSWY------------------LHIKEVEETDRGWYMCQ 157
            ..:::..:|.   ..|.|...||.    |.                  |:|..|..:|.|.|.|.
Mouse   325 IHVAMEESVFWECKANGRPKPTYR----WLKNGDPLLTRDRIQIEQGTLNITIVNLSDAGMYQCV 385

  Fly   158 V-NTDPMRSRKGYLQVVV-PPIIVEGLTSNDMVVREGQNISLVCKARGYPEPYVMWRREDGEEML 220
            . |...:......|.|:. .|.....|.....:|:.|..:.:.||.:..|.|...||:  |.|:|
Mouse   386 AENKHGVIFSSAELSVIAESPDFSRTLLKRVTLVKVGGEVVIECKPKASPRPVYTWRK--GREIL 448

  Fly   221 IGGEHVNVVDGELLHITKVSRLHMAAYLCVASN--GVPPSISKRVHLRVQFPPMLSIPNQLEGAY 283
            ...|.:.:.:...|.|..|::....:|.|:|:|  |...|....:   |:.|..:.:|.......
Mouse   449 RENERITISEDGNLRIINVTKSDAGSYTCIATNHFGTASSTGNVI---VKDPTKVMVPPSSMDVT 510

  Fly   284 LGQDVILECH-TEAYPASINYWTTERGDMIISDTSRAGDKYETTSTVSGYTKYMKLKIRAVGPND 347
            :|:.::|.|. |..:...|.:..|..|.:|  |..:.||.:|   .|.|......|.||.:....
Mouse   511 VGESIVLPCQVTHDHSLDIVFTWTFNGHLI--DFDKDGDHFE---RVGGQDSAGDLMIRNIQLKH 570

  Fly   348 FGTYRCVAKNSL---------------GETDGNIKLDEMPTPTTAIISEMSLLNRSYDGKRRH-- 395
            .|.|.|:.:.|:               |..:. :.:||: |.|||.:|..       .|...|  
Mouse   571 AGKYVCMVQTSVDKLSVAADLIVRGPPGPPEA-VTIDEI-TDTTAQLSWR-------PGPDNHSP 626

  Fly   396 --------RNKF----DSANALPD-----------YGVEEWRDGAQGNNAGN---------NGDN 428
                    |..|    .:.|.:||           .|:..|.:......|.|         ..:.
Mouse   627 ITMYVIQARTPFSVGWQAVNTVPDLVDGKTFTATVVGLNPWVEYEFRTVAANVIGIGEPSRPSEK 691

  Fly   429 NQTPVRNPPGAFHNSAGSLAQHNLLAKIMLGIKTQSFGIFKRLSSSLPLAAGQSF---------- 483
            .:|....|.....|.:|.           .|.|::....::.:...|....|..:          
Mouse   692 RRTEEALPEVTPANVSGG-----------GGSKSELVITWETVPEELQNGRGFGYVVAFRPHGKM 745

  Fly   484 LWLSTLSLVSAPSRWRMSNVENRPNSP 510
            :|:.|:...:..||:...|...||.||
Mouse   746 IWMLTVLASADASRYVFRNESVRPFSP 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 Ig 80..172 CDD:299845 25/124 (20%)
IG_like 82..174 CDD:214653 25/124 (20%)
IG_like 184..267 CDD:214653 21/84 (25%)
IGc2 191..255 CDD:197706 18/65 (28%)
IG_like 282..368 CDD:214653 22/101 (22%)
Ig 288..367 CDD:143165 21/94 (22%)
Cntn4NP_001103219.1 Ig 25..118 CDD:386229
Ig 120..213 CDD:386229 4/8 (50%)
Ig 225..313 CDD:386229 20/96 (21%)
Ig 318..401 CDD:386229 17/86 (20%)
Ig 422..494 CDD:386229 20/76 (26%)
Ig6_Contactin-4 513..597 CDD:143261 20/88 (23%)
FN3 597..690 CDD:238020 19/101 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 685..710 4/35 (11%)
FN3 703..792 CDD:238020 15/81 (19%)
FN3 804..896 CDD:238020
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 886..906
FN3 904..989 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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