DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DIP-kappa and pigrl4.2

DIOPT Version :9

Sequence 1:NP_723828.1 Gene:DIP-kappa / 318958 FlyBaseID:FBgn0051814 Length:672 Species:Drosophila melanogaster
Sequence 2:NP_001293038.1 Gene:pigrl4.2 / 105665605 ZFINID:ZDB-GENE-150409-10 Length:240 Species:Danio rerio


Alignment Length:106 Identity:27/106 - (25%)
Similarity:45/106 - (42%) Gaps:10/106 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 ANVTVSVGRDALMACVVENLKGYKV-AWVRVDTQTILSIHHNVISQNSRISLTYNDHRSWYLHIK 144
            ::|:...|.|..:.|...:....|: .|.|:|..|.........||||.:.::.:...|:.:.:.
Zfish   129 SSVSGHKGDDVSVRCFYRSAYQNKLKQWCRIDDLTCFREKKTDTSQNSSVQISDDGESSFTVLMT 193

  Fly   145 EVEETDRGWYMCQVNTDPMRSRKGYLQVVVPPIIVEGLTSN 185
            .:..:|.|||.|.|         |.|||.|...:.:|...|
Zfish   194 GLRLSDSGWYFCSV---------GNLQVPVQLTVYQGENKN 225

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DIP-kappaNP_723828.1 Ig 80..172 CDD:299845 22/91 (24%)
IG_like 82..174 CDD:214653 24/92 (26%)
IG_like 184..267 CDD:214653 1/2 (50%)
IGc2 191..255 CDD:197706
IG_like 282..368 CDD:214653
Ig 288..367 CDD:143165
pigrl4.2NP_001293038.1 IG_like 26..118 CDD:214653
Ig_pIgR 30..117 CDD:143193
Ig 133..217 CDD:299845 24/92 (26%)
IG_like 136..218 CDD:214653 24/90 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 40 1.000 Domainoid score I12510
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.