DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rsph9 and Rsph9

DIOPT Version :9

Sequence 1:NP_724049.1 Gene:Rsph9 / 318950 FlyBaseID:FBgn0051803 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_083614.1 Gene:Rsph9 / 75564 MGIID:1922814 Length:276 Species:Mus musculus


Alignment Length:272 Identity:97/272 - (35%)
Similarity:147/272 - (54%) Gaps:21/272 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GMKLSPEQRILIENSLIALQNDNRFTGMYLWGRITATKNDYYIAFGYTNDCLKDRKYFYSLDQFQ 81
            |..|||::|..:..||:.::.|.||..:..||||.....|||||.|.:.|.|..||..|||:..:
Mouse    17 GQGLSPDRRASLLTSLMLVKRDYRFARVLFWGRILGLVADYYIAQGLSEDQLAPRKTLYSLNCTE 81

  Fly    82 WQLLPFVQSPKIFQATILAREPFIGDPS-------LMTYVKLDPTFDIVGNQVAGISRPEVVKLK 139
            |.|||........|.::::.. |:||||       |....:.:..||          ...||::|
Mouse    82 WSLLPPATEEMAMQISVVSGR-FMGDPSHEYEHTELQKVNEGEKVFD----------EEVVVQIK 135

  Fly   140 EEERLAAIVFIITEECAICPRGAFYKMTDGRVIPNQMFRGLNDLQIDNQSYYQLYRLPRNDLK-V 203
            ||.||.:|:..|.:..||.||||.:|...|....|:.|.||...::...|.|..:| ...||| .
Mouse   136 EETRLVSIIDQIDKAVAIIPRGALFKTPFGVTHVNRTFEGLPLSEVRKLSSYFHFR-EAIDLKNK 199

  Fly   204 NLAKRSDYNYAIDFLDTIDCVIPLCQAFALNMQRNEGLVIIKSCLWLGMTFFHKINSHKHGFLYL 268
            .|.::||...::||||:::..||. .::::.|:|...||:::|.||.|:||:|...:..:|::|:
Mouse   200 TLLEKSDLEPSLDFLDSLEYDIPR-GSWSIQMERGNALVVLRSLLWPGLTFYHAPRTKNYGYIYV 263

  Fly   269 GDGKKNFDLLFM 280
            |.|:||.||.||
Mouse   264 GTGEKNMDLPFM 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsph9NP_724049.1 None
Rsph9NP_083614.1 Radial_spoke <17..274 CDD:282555 91/264 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843041
Domainoid 1 1.000 107 1.000 Domainoid score I6558
eggNOG 1 0.900 - - E1_2C9RZ
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H12606
Inparanoid 1 1.050 153 1.000 Inparanoid score I4322
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56448
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0008413
OrthoInspector 1 1.000 - - oto94513
orthoMCL 1 0.900 - - OOG6_104080
Panther 1 1.100 - - LDO PTHR22069
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5258
SonicParanoid 1 1.000 - - X6405
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.790

Return to query results.
Submit another query.