DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rsph9 and rsph9

DIOPT Version :10

Sequence 1:NP_724049.1 Gene:Rsph9 / 318950 FlyBaseID:FBgn0051803 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001025284.1 Gene:rsph9 / 558005 ZFINID:ZDB-GENE-051120-129 Length:277 Species:Danio rerio


Alignment Length:277 Identity:100/277 - (36%)
Similarity:153/277 - (55%) Gaps:16/277 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LDCLMYCGMKLSPEQRILIENSLIALQNDNRFTGMYLWGRITATKNDYYIAFGYTNDCLKDRKYF 74
            ||.....|:.||.|||..:::||:.::.:.:|:.:..||:|...|:||:||.|..:|.||:||..
Zfish    10 LDLAAANGLTLSSEQRAALQSSLLIVKRNYKFSRVLFWGKILGIKSDYFIAQGVEDDELKNRKSL 74

  Fly    75 YSLDQFQWQLLPFVQSPKIFQATILAREPFIGDPSLMTYVKLDPTFDIVGNQVAGISRPEV-VKL 138
            |||:...|.|||......|....:.|...|.|||| ..|...:...:..|::.   :..|| ||:
Zfish    75 YSLNCVDWHLLPPATESMIADVALAATGRFTGDPS-HEYEHTEIRTEGEGDEA---THEEVTVKV 135

  Fly   139 KEEERLAAIVFIITEECAICPRGAFYKMTDGRVIPNQMFRGLNDLQIDNQSYYQLYRLPRNDLKV 203
            .|..||||||..|.::.::.|||||.|..:|:|..|:.|.||:..:......|..:|.|.|....
Zfish   136 IEASRLAAIVSNIDKDVSVVPRGAFIKSPNGKVQTNRSFGGLHPTEAAKLRNYLHFREPVNLRNK 200

  Fly   204 NLAKRSDYNYAIDFLDTIDCVIPLCQ-----AFALNMQRNEGLVIIKSCLWLGMTFFHKINSHKH 263
            ::.:.|:.|.|:||||      ||.:     :::|.:.|...:.:::|.||||.||||...:.:|
Zfish   201 SILEMSELNPALDFLD------PLSEDILKGSWSLQLDRGGTVCVLRSLLWLGFTFFHVPQTPQH 259

  Fly   264 GFLYLGDGKKNFDLLFM 280
            |::|:|||..|.||.||
Zfish   260 GYIYMGDGLMNLDLPFM 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsph9NP_724049.1 None
rsph9NP_001025284.1 Radial_spoke <17..268 CDD:461405 92/260 (35%)

Return to query results.
Submit another query.