DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rsph9 and rsph9

DIOPT Version :9

Sequence 1:	NP_724049.1	Gene:	Rsph9 / 318950	FlyBaseID:	FBgn0051803	Length:	281	Species:	Drosophila melanogaster
Sequence 2:	NP_001005021.1	Gene:	rsph9 / 448532	XenbaseID:	XB-GENE-5941075	Length:	277	Species:	Xenopus tropicalis

Alignment Length:	287	Identity:	95/287 - (33%)
Similarity:	147/287 - (51%)	Gaps:	18/287 - (6%)

- Green bases have known domain annotations that are detailed below.

  Fly     1 MNLEFFTEGLDCLMYCGMKLSPEQRILIENSLIALQNDNRFTGMYLWGRITATKNDYYIAFGYTN 65
            |:.|..:..|:.:...|..||.||...:..||..|..|.|...:.|||.:...:.||.||.|:..
Frog     1 MDAETLSLSLELVSGSGPGLSAEQCAALRASLPLLHRDLRLRRLRLWGVVLGLRGDYVIARGWGG 65

  Fly    66 -DCLKDRKYFYSLDQFQWQLLPFVQSPKIFQAT-ILAREPFIGDPSLMTYVKLDPTFDIVGNQVA 128
             |.|:.:..||||:...|.|||......|.|.. |..|  |:|||:        ..::.:....|
Frog    66 PDLLRGQLSFYSLNCVDWCLLPPATDAHIAQTQGIKGR--FVGDPA--------HEYEYIVRNTA 120

  Fly   129 G-----ISRPEVVKLKEEERLAAIVFIITEECAICPRGAFYKMTDGRVIPNQMFRGLNDLQIDNQ 188
            |     :.......:|||.||...:.:|..|.|:.||||:.:...|:||.|..||||...:....
Frog   121 GGGDSALEEELTTHIKEEVRLTGTIAMIDREAAVAPRGAYIRNPLGQVIVNHSFRGLEVSEGKKL 185

  Fly   189 SYYQLYRLPRNDLKVNLAKRSDYNYAIDFLDTIDCVIPLCQAFALNMQRNEGLVIIKSCLWLGMT 253
            |.|..:....|..|.:|.:::..:.:|||||:::..||. .:::|.:::.:.::|::|.||||||
Frog   186 SSYFHFTPSLNPKKKSLLEKAALDPSIDFLDSLEHDIPR-GSWSLQLEQGDSVLILRSLLWLGMT 249

  Fly   254 FFHKINSHKHGFLYLGDGKKNFDLLFM 280
            |:|...:..||.||:|.|::|.||.||
Frog   250 FYHVPLTPLHGHLYIGTGERNLDLPFM 276

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rsph9	NP_724049.1	None
rsph9	NP_001005021.1	Radial_spoke	<82..275	CDD:368073	66/203 (33%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	138	1.000	Domainoid score	I4794
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H12606
Inparanoid	1	1.050	139	1.000	Inparanoid score	I4405
OMA	1	1.010	-	-		QHG56448
OrthoDB	1	1.010	-	-		D406052at33208
OrthoFinder	1	1.000	-	-		FOG0008413
OrthoInspector	1	1.000	-	-		oto104717
Panther	1	1.100	-	-	LDO	PTHR22069
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R5258
SonicParanoid	1	1.000	-	-		X6405
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	11	11.110