DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rsph9 and Rsph9

DIOPT Version :9

Sequence 1:NP_724049.1 Gene:Rsph9 / 318950 FlyBaseID:FBgn0051803 Length:281 Species:Drosophila melanogaster
Sequence 2:NP_001101675.2 Gene:Rsph9 / 316238 RGDID:1310693 Length:276 Species:Rattus norvegicus


Alignment Length:272 Identity:99/272 - (36%)
Similarity:148/272 - (54%) Gaps:21/272 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GMKLSPEQRILIENSLIALQNDNRFTGMYLWGRITATKNDYYIAFGYTNDCLKDRKYFYSLDQFQ 81
            |..|||::|..:..||:.::.|.||..:..||||.....|||||.|.:.|.|..||..|||:..:
  Rat    17 GQGLSPDRRASLLTSLMLVKRDYRFARVLFWGRILGLVADYYIAQGLSEDQLAPRKTLYSLNCTE 81

  Fly    82 WQLLPFVQSPKIFQATILAREPFIGDPS-------LMTYVKLDPTFDIVGNQVAGISRPEVVKLK 139
            |.|||......:.|.::::.. |:||||       |....:.|..||          ...||::|
  Rat    82 WSLLPPATEEMVTQTSVVSGR-FMGDPSHEYEHTELQKVSEGDKVFD----------EEVVVQIK 135

  Fly   140 EEERLAAIVFIITEECAICPRGAFYKMTDGRVIPNQMFRGLNDLQIDNQSYYQLYRLPRNDLK-V 203
            ||.||.:|:..|.:..||.||||.:|...|....|:.|.||...:|...|.|..:| ...||| .
  Rat   136 EETRLVSIIDQIDKAVAIVPRGALFKTPFGVTHVNRTFEGLPLSEIKKLSSYFHFR-EAIDLKNK 199

  Fly   204 NLAKRSDYNYAIDFLDTIDCVIPLCQAFALNMQRNEGLVIIKSCLWLGMTFFHKINSHKHGFLYL 268
            .|.:::|...::||||:::..||. .::::.|:|...||:::|.||.|:||:|...|..:|::|:
  Rat   200 TLLEKADLEPSLDFLDSLEYDIPR-GSWSIQMERGNALVVLRSLLWPGLTFYHAPRSKNYGYIYV 263

  Fly   269 GDGKKNFDLLFM 280
            |.|:||.||.||
  Rat   264 GTGEKNMDLPFM 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rsph9NP_724049.1 None
Rsph9NP_001101675.2 Radial_spoke <17..274 CDD:398404 93/264 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346546
Domainoid 1 1.000 108 1.000 Domainoid score I6363
eggNOG 1 0.900 - - E1_2C9RZ
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H12606
Inparanoid 1 1.050 155 1.000 Inparanoid score I4219
OMA 1 1.010 - - QHG56448
OrthoDB 1 1.010 - - D406052at33208
OrthoFinder 1 1.000 - - FOG0008413
OrthoInspector 1 1.000 - - oto98025
orthoMCL 1 0.900 - - OOG6_104080
Panther 1 1.100 - - LDO PTHR22069
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6405
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1413.810

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