DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31802 and Efcab11

DIOPT Version :10

Sequence 1:NP_724103.1 Gene:CG31802 / 318949 FlyBaseID:FBgn0051802 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001019521.1 Gene:Efcab11 / 500705 RGDID:1565006 Length:162 Species:Rattus norvegicus


Alignment Length:140 Identity:33/140 - (23%)
Similarity:68/140 - (48%) Gaps:2/140 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DLSLSQKVDIKKAFDLFDTQCTGFIETKELRVAIRAL-GFEPKKEDIKRMMDEIDKDKTGRIAFN 101
            ::|.|::....:.|...|....|::..::.:|||..| |::|.|.:...:|...:.|.:| ::..
  Rat    14 EISASERRKWVEVFKACDEDNKGYLSREDFKVAIVMLFGYKPSKIEADAVMSSANPDTSG-VSLE 77

  Fly   102 DFLYLMRLKMAEKDSNQDMMKAFSFFDDDRTGGISFLNLKRVAKELGEQLTDEELQEMIDEANVS 166
            .||.:::.|...:....::...|:.||....|.::..:.||...::..:|....:.|:..||:..
  Rat    78 GFLNVVQRKKEAQLYRNEIRHIFTAFDVHYRGFLTLEDFKRAFSQVAPKLPSRTVLEVFREADQD 142

  Fly   167 GDGEVSKEEF 176
            .||.||..:|
  Rat   143 SDGHVSFRDF 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31802NP_724103.1 PTZ00183 38..185 CDD:185503 33/140 (24%)
Efcab11NP_001019521.1 FRQ1 20..156 CDD:444056 31/134 (23%)

Return to query results.
Submit another query.