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Protein Alignment CG31787 and Tmed10

DIOPT Version :10

Sequence 1:	NP_724105.1	Gene:	CG31787 / 318941	FlyBaseID:	FBgn0051787	Length:	232	Species:	Drosophila melanogaster
Sequence 2:	NP_445919.1	Gene:	Tmed10 / 84599	RGDID:	620970	Length:	219	Species:	Rattus norvegicus

Alignment Length:	232	Identity:	49/232 - (21%)
Similarity:	85/232 - (36%)	Gaps:	59/232 - (25%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 LLQLLLL-----LDLKFSNAEPHNKQLTVFAEAGRQECFYQPIATTENIKIDYQVIHGGLGETHI 69
            ||.|.||     |.:.|        .|.|.:....:|..::.:..|...:|..|  .||.|....
  Rat    18 LLFLFLLGPSSVLGISF--------HLPVNSRKCLREEIHKDLLVTGAYEITDQ--SGGAGGLRT 72

  Fly    70 NFNLMDPSRRLLIAETKRQMGKHSIQANETGSYKFCFDNT-----------------ISTFNQKI 117
            :..:.|.:..:|.|:.....||.:....:...::.||::.                 :...|.:.
  Rat    73 HLKITDSAGHILYAKEDATKGKFAFTTEDYDMFEVCFESKGTGRIPDQLVILDMKHGVEAKNYEE 137

  Fly   118 VSFTLEVAPADREERELRDLRQEMLTDYHFDVAYTGIDSYVGKIHVNLMRSRQTQDFIRAIEARD 182
            ::...::.|.:.|.|.|.||.:.::.|:    ||              |:.|:.       |.||
  Rat   138 IAKVEKLKPLEVELRRLEDLSESIVNDF----AY--------------MKKREE-------EMRD 177

  Fly   183 RNVAESTYSMVNKWSWAQFLSMIFVGFLQVLMVRSIF 219
            .|  |||.:.|..:|......:|.:...||..:|..|
  Rat   178 TN--ESTNTRVLYFSIFSMFCLIGLATWQVFYLRRFF 212

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.