DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31787 and Tmed6

DIOPT Version :10

Sequence 1:NP_724105.1 Gene:CG31787 / 318941 FlyBaseID:FBgn0051787 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_079734.1 Gene:Tmed6 / 66269 MGIID:1913519 Length:239 Species:Mus musculus


Alignment Length:252 Identity:64/252 - (25%)
Similarity:108/252 - (42%) Gaps:46/252 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFRIARVIWLLQLLLLLDLKFSNAEP-H-NKQLTVFAEAGRQ-----------ECFYQPIATTEN 52
            ||.:..|..|:.|.|:..:|....:| | :|...:|..|.|.           |||:|.......
Mouse     1 MFPLLLVAELVVLSLVTSVKSQETDPLHGSKDQPLFRGADRNDFAIVVSPGAIECFWQFADQMGY 65

  Fly    53 IKIDYQV--IHGGLGETHINFNLMDPSRRLLIAETKRQMGKHSIQANETGSYKFCFDNTISTFN- 114
            :...|:|  |.|...:.||......| :..||..::...|:.:....|||.|:.|..|..:.|: 
Mouse    66 LYFSYEVQRILGMSHDRHIVATAHTP-QGFLIDTSQDVRGQINFATQETGFYQLCLKNEQNRFSS 129

  Fly   115 -QKIVSFTL-----EVAPADREERELRDLRQEMLTDYHFDVAYTGIDSYVGKIHV----NLMRSR 169
             |..::|.:     ||.....:.::|.| ..:.:.|     :...:::.|  .|:    |..|.|
Mouse   130 IQVYLNFGVFYEGPEVDHKQSQRKQLND-TLDAIKD-----STQRVENQV--FHMWRFYNYARMR 186

  Fly   170 QTQDFIRAIEARDRNVAESTYSMVNKWSWAQFLSMIFVGFLQVLMVRSIF--NTTGT 224
            :..||.         :.:|.|:.||.||.||.|:::..|.||:..::.:|  :||.|
Mouse   187 KVADFF---------LLQSNYTYVNWWSTAQSLAIVLSGALQLYFLKRLFTASTTDT 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31787NP_724105.1 EMP24_GP25L 31..220 CDD:426051 51/214 (24%)
Tmed6NP_079734.1 EMP24_GP25L 43..227 CDD:426051 47/201 (23%)

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