DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31787 and tmed4

DIOPT Version :10

Sequence 1:NP_724105.1 Gene:CG31787 / 318941 FlyBaseID:FBgn0051787 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_001002134.2 Gene:tmed4 / 415224 ZFINID:ZDB-GENE-040625-140 Length:222 Species:Danio rerio


Alignment Length:161 Identity:35/161 - (21%)
Similarity:74/161 - (45%) Gaps:17/161 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 GLGETHINFNLMDPSRRLLIAETKRQMGKHSIQANETGSYKFCFDNTISTFNQKIVSFTLEVAPA 127
            |||   ::..:.||..:::::......|:.:..::..|.::.|..:.    :.|:..|      |
Zfish    69 GLG---MHVEIKDPETKVILSRQYGSDGRFTFTSHTPGEHQICLHSN----STKMALF------A 120

  Fly   128 DREERELRDLRQEMLTDYHFDVA----YTGIDSYVGKIHVNLMRSRQTQDFIRAIEARDRNVAES 188
            ..:.|...|::....|:.:.::|    .|.:...|.::...:.:.::.|::.|..|.|.|..:||
Zfish   121 GGKLRVHLDIQVGEHTNNYPEIAAKDKLTELQLRVRQLLDQVEQIQKEQNYQRYREERFRMTSES 185

  Fly   189 TYSMVNKWSWAQFLSMIFVGFLQVLMVRSIF 219
            |...|..||.||.:.:|..|..|:..::|.|
Zfish   186 TNQRVLWWSIAQTVILIITGIWQMKHLKSFF 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31787NP_724105.1 EMP24_GP25L 31..220 CDD:426051 35/161 (22%)
tmed4NP_001002134.2 EMP24_GP25L 24..217 CDD:426051 35/161 (22%)

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