DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31787 and tmed-4

DIOPT Version :10

Sequence 1:NP_724105.1 Gene:CG31787 / 318941 FlyBaseID:FBgn0051787 Length:232 Species:Drosophila melanogaster
Sequence 2:NP_507861.1 Gene:tmed-4 / 180307 WormBaseID:WBGene00013360 Length:211 Species:Caenorhabditis elegans


Alignment Length:235 Identity:53/235 - (22%)
Similarity:89/235 - (37%) Gaps:55/235 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VIWLLQLLLLLD-LKFSNAEPHNKQLTVFAEAGRQECFYQPI----ATTENIKID-YQVIHGGLG 65
            :|.||.|....| |.|..||...|            ||.:.|    ..|.|.|:. |.....|.|
 Worm     4 LIALLSLATYADSLYFHIAETEKK------------CFIEEIPDETMVTGNYKVQLYDPNTKGYG 56

  Fly    66 E-----THINFNLMDPSRRLLIAETKRQMGKHSIQANETGSYKFC-FDNTISTFNQKIVSFTLEV 124
            :     .|:  .:.||..::::::.....|:.:..:|..|.:..| :.|:.:.||...:...|::
 Worm    57 DYPNIGMHV--EVKDPEDKVILSKLYTAEGRFTFTSNTPGEHVICIYSNSTAWFNGAQLRVHLDI 119

  Fly   125 APADREERELRDLRQEMLTDYHFDVAYTGIDSYVGKIHVNLMRSRQ----------TQDFIRAIE 179
            ...|..:...:..:::.|.:..                   :|.||          .|::.|..|
 Worm   120 QAGDHAQDYAQIAQKDKLNELQ-------------------LRIRQLLDQVDQITKEQNYQRYRE 165

  Fly   180 ARDRNVAESTYSMVNKWSWAQFLSMIFVGFLQVLMVRSIF 219
            .|.|..:|||.|.|..||.||.:.:...|..|:..:|..|
 Worm   166 ERFRQTSESTNSRVFYWSIAQVVVLAITGAWQMRHLRGFF 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31787NP_724105.1 EMP24_GP25L 31..220 CDD:426051 43/210 (20%)
tmed-4NP_507861.1 EMP24_GP25L 16..206 CDD:426051 48/223 (22%)

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