DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acp24A4 and Aplp1

DIOPT Version :9

Sequence 1:NP_001036330.1 Gene:Acp24A4 / 318936 FlyBaseID:FBgn0051779 Length:78 Species:Drosophila melanogaster
Sequence 2:XP_038944236.1 Gene:Aplp1 / 502317 RGDID:69257 Length:655 Species:Rattus norvegicus


Alignment Length:60 Identity:19/60 - (31%)
Similarity:24/60 - (40%) Gaps:15/60 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LLILLFVFIALASNSLALKNEICGLPAAAN--------GNC--LALF-----SRWSYDAQ 47
            |.:||.:.:.|....||:.|...|.|:||.        |.|  |.|.     .||..|.|
  Rat    20 LPLLLPLSLLLLRAQLAVGNLAGGSPSAAEAPGSAQVAGLCGRLTLHRDLRTGRWEPDPQ 79

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acp24A4NP_001036330.1 Kunitz_BPTI 24..77 CDD:278443 12/39 (31%)
Aplp1XP_038944236.1 A4_EXTRA 46..211 CDD:128326 10/34 (29%)
APP_E2 289..471 CDD:403970
JMTM_Notch_APP 569..653 CDD:425406
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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