DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimA and SCARF1

DIOPT Version :9

Sequence 1:NP_001285918.1 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster
Sequence 2:NP_003684.2 Gene:SCARF1 / 8578 HGNCID:16820 Length:830 Species:Homo sapiens


Alignment Length:557 Identity:115/557 - (20%)
Similarity:162/557 - (29%) Gaps:232/557 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 CCQGYEGNLSDSQATCKPICRG--GCGRGS-CVMPDICSCEEGYIGKHCTQRCDHDRWGLDCKNL 173
            ||.|:  ...|.:.|. |||.|  .|.:.. ||.|.:|.|:.|:.|.||:.||....||.||:..
Human    41 CCAGW--RQKDQECTI-PICEGPDACQKDEVCVKPGLCRCKPGFFGAHCSSRCPGQYWGPDCRES 102

  Fly   174 CQCQ--------NGAA----------------------CDNKSGLCHCIAGW------------- 195
            |.|.        .||.                      ||..:|:|||..||             
Human   103 CPCHPHGQCEPATGACQCQADRWGARCEFPCACGPHGRCDPATGVCHCEPGWWSSTCRRPCQCNT 167

  Fly   196 ----------------------------------------------------------------- 195
                                                                             
Human   168 AAARCEQATGACVCKPGWWGRRCSFRCNCHGSPCEQDSGRCACRPGWWGPECQQQCECVRGRCSA 232

  Fly   196 -----------TGQFCELPCPQGTYGIMCRKACD-C-DEKPCNPQTGAC---------IQQDQPL 238
                       .|..||||||.|::|:.|..:|. | ..:||:|.||:|         .|..|| 
Human   233 ASGECTCPPGFRGARCELPCPAGSHGVQCAHSCGRCKHNEPCSPDTGSCESCEPGWNGTQCQQP- 296

  Fly   239 QLNVSHVIVETVNSTLEK-------------------------MGIIPRPTTPVPLPEVIVIKQP 278
                  .:..|...:.|:                         :|  ||...|.|        ..
Human   297 ------CLPGTFGESCEQQCPHCRHGEACEPDTGHCQRCDPGWLG--PRCEDPCP--------TG 345

  Fly   279 TSNENAQHSPKIIVHQSSSDLLENLHTAAAAGVPT-----PEVIHVITNGITSPQEHLAGFVGGE 338
            |..|:...:....|..|...:..:...:|....|:     |...|  .|..:.|.|...|.....
Human   346 TFGEDCGSTCPTCVQGSCDTVTGDCVCSAGYWGPSCNASCPAGFH--GNNCSVPCECPEGLCHPV 408

  Fly   339 ANSSQTATADHQSGLVV-TLVSIMLLLL-VAIAVGSLYVYR-----RYHHKNAAVYNAN----GT 392
            :.|.|..:....:.|:. :||.::||.| :|......:..|     |.....|.|....    ||
Human   409 SGSCQPGSGSRDTALIAGSLVPLLLLFLGLACCACCCWAPRSDLKDRPARDGATVSRMKLQVWGT 473

  Fly   393 VT----TLPA----------------NPEVVLTEAAVLGKNFHEPLPEPPVAFAVTPQSNEAQPE 437
            :|    |||.                :|||          .|:....|||.|...|..|..:.||
Human   474 LTSLGSTLPCRSLSSHKLPWVTVSHHDPEV----------PFNHSFIEPPSAGWATDDSFSSDPE 528

  Fly   438 LYDSPSNNSSIKTPPYAYARKESLYSVVSPKSRKGSL 474
                  :..:.:.|.|....:|.:..|....|.:.||
Human   529 ------SGEADEVPAYCVPPQEGMVPVAQAGSSEASL 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimANP_001285918.1 EMI 52..116 CDD:284877 2/3 (67%)
EGF_2 170..200 CDD:285248 14/148 (9%)
SCARF1NP_003684.2 CSRNP_N <100..135 CDD:292638 4/34 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 516..539 5/28 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 581..688
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 715..830
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.900

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