DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimA and pear1

DIOPT Version :10

Sequence 1:NP_609691.6 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster
Sequence 2:XP_700533.4 Gene:pear1 / 571812 ZFINID:ZDB-GENE-091230-1 Length:1020 Species:Danio rerio


Alignment Length:190 Identity:69/190 - (36%)
Similarity:93/190 - (48%) Gaps:19/190 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 NICIREEPYVEHVQVPEMQPVRVRTSSWCMEIPP----RCA----TFKTEMREVMRVQKLNKTRT 108
            |:|...|.:...|:....||....:...|.|  |    :|.    |:||..|:|:::....:.: 
Zfish    29 NVCSLWESFTTSVKESYAQPFDQMSEEPCSE--PWSANKCTRHRITYKTLYRQVVKMDYRRRYQ- 90

  Fly   109 VRFCCQGYEGNLSDSQATCKPICRGGCGRGSCVMPDICSCEEGYIGKHCTQRCDHDRWGLDCKNL 173
               ||.|:    .:|:..|.|.|...|..|.||.||.|.||.|:.|..|:..||...||..|:.|
Zfish    91 ---CCPGF----YESRNKCVPRCTKECVHGRCVAPDRCQCEMGWRGDDCSSSCDGQHWGPGCRRL 148

  Fly   174 CQCQNGAACDNKSGLCHCIAGWTGQFCELPCPQGTYGIMCRKACDCDEKP-CNPQTGACI 232
            |:||||..||..:|.|.|.||:|||.|..|||...:|..||:.|.|.... ||..||.|:
Zfish   149 CECQNGGECDVLTGNCQCPAGYTGQHCHDPCPVKWFGQGCRQECQCGTGGICNQTTGECV 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimANP_609691.6 EMI 51..118 CDD:462204 18/73 (25%)
pear1XP_700533.4 EMI 28..97 CDD:462204 18/77 (23%)
Laminin_EGF 411..451 CDD:395007
Blue background indicates that the domain is not in the aligned region.

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