DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimA and STAB2

DIOPT Version :9

Sequence 1:NP_001285918.1 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster
Sequence 2:NP_060034.9 Gene:STAB2 / 55576 HGNCID:18629 Length:2551 Species:Homo sapiens


Alignment Length:696 Identity:136/696 - (19%)
Similarity:207/696 - (29%) Gaps:305/696 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 GNICIREEPYVEHVQVPEMQPVRVRTSSWCMEIPPRCATFKTEMREVMRVQKLNKTRTVRFCCQG 115
            |::.:|:..|.          ..|||.|..:   |.|       |.:.|...|...     ||.|
Human    64 GSVGVRDCRYT----------FEVRTYSLSL---PGC-------RHICRKDYLQPR-----CCPG 103

  Fly   116 YEGNLSDSQATCKPICRGGC-----GRGSCVM----PDICSCEEGYIGKHCTQRCDHDRWGLDCK 171
            ..|      ..|.. |.||.     |||||..    ...|||:||:.|..|....|.:.:|..|.
Human   104 RWG------PDCIE-CPGGAGSPCNGRGSCAEGMEGNGTCSCQEGFGGTACETCADDNLFGPSCS 161

  Fly   172 NLCQCQNGAACD---NKSGLCHCIAGWTGQFCELP--------CPQGTY---------------- 209
            ::|.|.:| .|:   :..|.|.|.:.:||..|:.|        ||:.:.                
Human   162 SVCNCVHG-VCNSGLDGDGTCECYSAYTGPKCDKPIPECAALLCPENSRCSPSTEDENKLECKCL 225

  Fly   210 ------GIMC-----------------------RKACDCDE------------KPCNPQTGAC-- 231
                  |..|                       |.:|.|.|            .||....|.|  
Human   226 PNYRGDGKYCDPINPCLRKICHPHAHCTYLGPNRHSCTCQEGYRGDGQVCLPVDPCQINFGNCPT 290

  Fly   232 -----------------------------------IQQDQPLQLNVSHVIVE------------- 248
                                               .:.|.|...|.:...|.             
Human   291 KSTVCKYDGPGQSHCECKEHYQNFVPGVGCSMTDICKSDNPCHRNANCTTVAPGRTECICQKGYV 355

  Fly   249 --------TVNSTLEKMGIIPR--------------------------PTTPVPLP--------- 270
                    .:...|.::...||                          |.| |.||         
Human   356 GDGLTCYGNIMERLRELNTEPRGKWQGRLTSFISLLDKAYAWPLSKLGPFT-VLLPTDKGLKGFN 419

  Fly   271 --EVIVIKQPTSNENAQHSPK--IIVHQSSSDLLENLHTAAAAGVPTPEVIHVITNGITSPQEHL 331
              |::|     .|:.||:..|  ||..|.:.:.:.|           .::.:.:|          
Human   420 VNELLV-----DNKAAQYFVKLHIIAGQMNIEYMNN-----------TDMFYTLT---------- 458

  Fly   332 AGFVGGEANSSQTATADHQSGLVV----TLVSIMLLLLVAIAVGSLYVYRRYHHKNAAVYNANG- 391
                 |::.....:..|:|..|.:    ..|.|:...::| :.|.|::..|...|....:.:|. 
Human   459 -----GKSGEIFNSDKDNQIKLKLHGGKKKVKIIQGDIIA-SNGLLHILDRAMDKLEPTFESNNE 517

  Fly   392 -TVTTLPANPEVVLTEAAVLGKNFHEPLPEPPVA--FAVTPQSNEAQPELYDSPSNNSSIKTPPY 453
             |:.|: ..|......:.:...|....|.|..|.  :.:...:|||        .||....|..|
Human   518 QTIMTM-LQPRYSKFRSLLEETNLGHALDEDGVGGPYTIFVPNNEA--------LNNMKDGTLDY 573

  Fly   454 AYARKESLYSVVSPK-SRKGSLDSHLYDEIRYHQQHHHQQH--------HPRS--HQHVQHSTTA 507
                      ::||: |||      |.:.:|||.....|..        |.||  :|.:|.:||.
Human   574 ----------LLSPEGSRK------LLELVRYHIVPFTQLEVATLISTPHIRSMANQLIQFNTTD 622

  Fly   508 SQFLPARPQIMPAND--------QFSNGSVHPHQRSHHVTHLIIPP 545
            :      .||: |||        ...||      |.:.:|.::|||
Human   623 N------GQIL-ANDVAMEEIEITAKNG------RIYTLTGVLIPP 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimANP_001285918.1 EMI 52..116 CDD:284877 13/63 (21%)
EGF_2 170..200 CDD:285248 10/32 (31%)
STAB2NP_060034.9 EGF_3 246..275 CDD:289699 4/28 (14%)
EGF_3 326..361 CDD:289699 4/34 (12%)
Fasciclin 382..505 CDD:280607 26/155 (17%)
Fasciclin 526..654 CDD:280607 38/164 (23%)
EGF_3 837..865 CDD:289699
EGF_3 920..951 CDD:289699
EGF_3 957..993 CDD:289699
Fasciclin 1009..1129 CDD:280607
Fasciclin 1148..1265 CDD:280607
EGF_3 1437..1469 CDD:289699
EGF_3 1475..1511 CDD:289699
EGF_3 1517..1553 CDD:289699
EGF_3 1559..1595 CDD:289699
Fasciclin 1617..1726 CDD:280607
Fasciclin 1752..1882 CDD:280607
EGF_3 2086..2121 CDD:289699
EGF_3 2127..2164 CDD:289699
Link_domain_TSG_6_like 2198..2290 CDD:239592
FAS1 2356..2449 CDD:214719
Interaction with TMSB4X. /evidence=ECO:0000269|PubMed:18519035 2504..2514
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2512..2551
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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