DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NimA and STAB1

DIOPT Version :9

Sequence 1:NP_001285918.1 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster
Sequence 2:XP_016861487.1 Gene:STAB1 / 23166 HGNCID:18628 Length:2615 Species:Homo sapiens


Alignment Length:695 Identity:138/695 - (19%)
Similarity:213/695 - (30%) Gaps:285/695 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 CIREEPYVEHVQVPEMQPVRVRT--SSWCMEIPPRC---ATFKTEM----------REVMRVQKL 103
            |..:..:|.||.......::.:|  |.|..|:|.:.   ..::.::          |...|.|.:
Human    32 CDVKTTFVTHVPCTSCAAIKKQTCPSGWLRELPDQITQDCRYEVQLGGSMVSMSGCRRKCRKQVV 96

  Fly   104 NKTRTVRFCCQGYEGNLSDSQATCKPICRGGC-----GRGSCV----MPDICSCEEGYIGKHCTQ 159
            .|.     ||.||.|      :.|.. |.||.     |.|:|:    ....|.|:|.:.|..|.:
Human    97 QKA-----CCPGYWG------SRCHE-CPGGAETPCNGHGTCLDGMDRNGTCVCQENFRGSACQE 149

  Fly   160 RCDHDRWGLDCKNLCQCQNGAACDN---KSGLCHCIAGWTGQFC--------ELPCPQGT----- 208
            ..|.:|:|.||:::|.|.:| .|::   ..|.|.|.||:||..|        ||.|||.|     
Human   150 CQDPNRFGPDCQSVCSCVHG-VCNHGPRGDGSCLCFAGYTGPHCDQELPVCQELRCPQNTQCSAE 213

  Fly   209 ------------YGIMCRKACDCDEKPCNPQTGACIQQDQPLQLNVSHVIVETVNSTLEKMGIIP 261
                        .|..||....|...||                           |.|.:..:.|
Human   214 APSCRCLPGYTQQGSECRAPNPCWPSPC---------------------------SLLAQCSVSP 251

  Fly   262 RPTTPVPLPE-------VIVIKQPTSNENAQHSPK---IIVHQSSSDL-------LENLHTAAAA 309
            :.......||       |.:.|.|.: :|....|.   :.|:|.....       |.::::.|:|
Human   252 KGQAQCHCPENYHGDGMVCLPKDPCT-DNLGGCPSNSTLCVYQKPGQAFCTCRPGLVSINSNASA 315

  Fly   310 G---------VPTPEVIHVITNGITS--PQEHLAGFVGGEA------NSSQTATADHQSGLVVTL 357
            |         ........|..:|.||  .:|...|  .|.|      :..|.||   |:|     
Human   316 GCFAFCSPFSCDRSATCQVTADGKTSCVCRESEVG--DGRACYGHLLHEVQKAT---QTG----- 370

  Fly   358 VSIMLLLLVAIAV-------------------------------GSL------------------ 373
             .:.|.|.||:|:                               .||                  
Human   371 -RVFLQLRVAVAMMDQGCREILTTAGPFTVLVPSVSSFSSRTMNASLAQQLCRQHIIAGQHILED 434

  Fly   374 ----------------------------YVYRRYHHKNAAVYNANG--------TVTTL------ 396
                                        |.|:....:...:|.||.        .||.|      
Human   435 TRTQQTRRWWTLAGQEITVTFNQFTKYSYKYKDQPQQTFNIYKANNIAANGVFHVVTGLRWQAPS 499

  Fly   397 --PANPE------VVLTEA----AVLGKNFHEP-LPEPPVAFAVTPQSNEAQPELYDSPSNNSSI 448
              |.:|:      :..|||    ..:.:|...| :.:.|..|.|...||||...|.|.       
Human   500 GTPGDPKRTIGQILASTEAFSRFETILENCGLPSILDGPGPFTVFAPSNEAVDSLRDG------- 557

  Fly   449 KTPPYAYARKESLYSVVSPKSRKGSLDSHLYDEIRYHQQHHHQQHHPRSHQHVQHSTTASQFLPA 513
                      ..:|...:..|:       |.:.:|||..:|.|....:.....:..|.|:|.|..
Human   558 ----------RLIYLFTAGLSK-------LQELVRYHIYNHGQLTVEKLISKGRILTMANQVLAV 605

  Fly   514 R----------PQIMP---ANDQFSNGSVHPHQRSHHVTHLIIPP 545
            .          |:.:|   .:...:||.:      |.:..:::||
Human   606 NISEEGRILLGPEGVPLQRVDVMAANGVI------HMLDGILLPP 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimANP_001285918.1 EMI 52..116 CDD:284877 15/76 (20%)
EGF_2 170..200 CDD:285248 12/32 (38%)
STAB1XP_016861487.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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