DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimA and Stab1

DIOPT Version :9

Sequence 1:NP_001285918.1 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster
Sequence 2:NP_619613.2 Gene:Stab1 / 192187 MGIID:2178742 Length:2571 Species:Mus musculus


Alignment Length:598 Identity:120/598 - (20%)
Similarity:184/598 - (30%) Gaps:217/598 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 CCQGYEGNLSDSQATCKPICRGG----C-GRGSCVMPD------ICSCEEGYIGKHCTQRCDHDR 165
            ||.||.|      :.|.. |.||    | |.|:|:  |      .|.|:|.:.|..|.:..|.:|
Mouse   101 CCPGYWG------SQCFE-CPGGPATPCSGHGTCL--DGIEGNGTCVCQENFSGSVCQECRDPNR 156

  Fly   166 WGLDCKNLCQCQNGAACDN---KSGLCHCIAGWTGQFC--ELP------CPQGTYGIMCRKACDC 219
            :|.||:::|.|.:| .|.:   ..|.|.|.||:||..|  |||      |||.:       .|..
Mouse   157 FGPDCQSVCNCVHG-VCSHGPRGDGSCRCFAGYTGPHCDQELPVCQSLKCPQNS-------QCSA 213

  Fly   220 DEKPC------NPQTGACIQQDQPLQLNVSHVIVETVNSTLEKMGIIPRPTTPVPLPE------- 271
            :...|      ..|...|:..| |.|        .:..|.|.:..:.|:.......||       
Mouse   214 EAPTCKCLPGYTQQDNVCLAPD-PCQ--------PSACSPLARCSVTPQGQAQCQCPENYHGDGK 269

  Fly   272 VIVIKQP-------------------------------TS-NENAQHSPKIIVHQSSSDLLENLH 304
            |.:.:.|                               || |.||.....:.....|.|     .
Mouse   270 VCLPRDPCLTNFGGCPSNSTFCLYRGPGKATCMCRPGMTSINNNASEGCHVSCKPHSCD-----R 329

  Fly   305 TAAAAGVPTPEVIHVITNGITSPQEHLAGFVGGEANSSQTATADHQSGLVVTLVSIMLLLL---- 365
            :|.....|..:...|..|..........|.:..|...:      :|:|||...:...:.:|    
Mouse   330 SATCQVTPDRKTSCVCKNDEVGDGHACYGHLLHEVRRA------NQNGLVFLRLRAAIAMLEQGC 388

  Fly   366 ---------VAIAVGSLYVYRRYHHKNAAVYNANGTVTTLPANPEVVL----------------- 404
                     ..:.|.|::      ..::...|.|.|:........|:.                 
Mouse   389 QEILTTSGPFTVLVPSMF------SVSSVSSNMNATLAQQLCRQHVIAGEHMLENAGPPSTRRWW 447

  Fly   405 ----TEAAVLGKNF-----HEPLPEP------------PVAFAVTPQSNEAQPEL-YDSPSNNSS 447
                .|..:..||.     :|..|:.            .|...||....:..|.| .||......
Mouse   448 TLAGQEVTITFKNMRYAYKYEDQPQQFSIHKANYIAANGVFHTVTALRWQLPPPLPGDSKKTVGQ 512

  Fly   448 IKTPPYAYARKESL---------------YSVVSPKS------RKGSLD-------SHLYDEIRY 484
            |......:.|.|::               ::|.:|.:      |.|.|.       |.|.:.:||
Mouse   513 ILASTEVFTRFETILENCGLPSILDGPGPFTVFAPSNEAVDSLRDGRLIYLFTAGLSKLQELVRY 577

  Fly   485 HQQHHHQQHHPRSHQHVQHSTTASQFL-----------------PARPQIMPANDQFSNGSVHPH 532
            |..:|.|....:.....:..|.|:|.|                 |.|...:||    :||.:   
Mouse   578 HIYNHGQLTVEKLISKGRVLTMANQVLTVNISEEGRILLGPEGIPVRRVDVPA----ANGVI--- 635

  Fly   533 QRSHHVTHLIIPP 545
               |.:..:::||
Mouse   636 ---HMLEGILLPP 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimANP_001285918.1 EMI 52..116 CDD:284877 2/3 (67%)
EGF_2 170..200 CDD:285248 12/32 (38%)
Stab1NP_619613.2 Fasciclin 520..644 CDD:280607 25/133 (19%)
EGF_3 915..946 CDD:289699
EGF_3 952..988 CDD:289699
Fasciclin 1000..1121 CDD:280607
EGF_3 1460..1496 CDD:289699
EGF_3 1502..1539 CDD:289699
EGF_3 1545..1582 CDD:289699
Fasciclin 1607..1711 CDD:280607
Fasciclin 1737..1867 CDD:280607
EGF_Lam <1992..2021 CDD:214543
EGF_3 2095..2130 CDD:289699
EGF_3 2136..2173 CDD:289699
Link_Domain 2208..2300 CDD:295393
FAS1 2367..2463 CDD:214719
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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