DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimA and dlk1

DIOPT Version :9

Sequence 1:NP_001285918.1 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster
Sequence 2:XP_005173621.1 Gene:dlk1 / 101883341 -ID:- Length:322 Species:Danio rerio


Alignment Length:377 Identity:70/377 - (18%)
Similarity:108/377 - (28%) Gaps:167/377 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 FCCQGYEG-----------NLSDSQATCKPICRGG--------------CGRGSCVMPDICSCEE 150
            |||...:|           ...:....|:  |:.|              |..|.|..|..|.||.
Zfish    15 FCCAAAQGPDCGAGCHRHHGFCEQSGECR--CKSGWRGAVCDQCVPSADCVHGWCESPGECICES 77

  Fly   151 GYIGKHC--------TQRCDHDRWGLD---------------CK--------NLCQCQNGAAC-- 182
            |:.|..|        :|.|..|...:|               |:        |...||||.:|  
Zfish    78 GWSGARCDRDVRPCSSQPCSADSRCVDAAGGRGHVCICTATHCRTEETHCTVNGSLCQNGGSCVS 142

  Fly   183 -------------------DNKSGLCHCIAGWTGQFCELPCPQGTYGIMCRKACDCDEKPCNPQT 228
                               .:.|..|.|.||:||..|||            ::..|....| ...
Zfish   143 SSSSFNTSSSSSNTSSSPSSSSSSSCLCPAGFTGSLCEL------------QSAVCKSSVC-VNG 194

  Fly   229 GACIQQDQPLQLNVSHVIVETVNSTLEKMGIIPRPTTPVPLPEVIVIKQPTSNENAQHSPKIIVH 293
            |.|:::                       |:..|         .:..::.:.:...:|.|::...
Zfish   195 GRCVRR-----------------------GLSYR---------CVCARRFSGSSCERHRPRVKAP 227

  Fly   294 QSSSDLLENLHTAAAAGVPTPEVIHVITNGITSPQEHLAGFVGGEANSSQTATADHQSGLVVTLV 358
            |..       |||....:.||                     |..|:.||           :...
Zfish   228 QQH-------HTALHKPLETP---------------------GALASRSQ-----------LICF 253

  Fly   359 SIMLLLLVAIAVGSLYVYRRYHHKNAAVYNANGTVTTLPANP-EVVLTEAAV 409
            |::.||.|.:.:||..:   ...:...|:.||.....|.|.. |::..:|.|
Zfish   254 SVLALLTVLVVLGSTAI---VFFQRCEVWMANVRYRQLVAQQRELIQDQATV 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimANP_001285918.1 EMI 52..116 CDD:284877 3/4 (75%)
EGF_2 170..200 CDD:285248 14/58 (24%)
dlk1XP_005173621.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24052
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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