DRSC/TRiP Functional Genomics Resources

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Protein Alignment NimA and lama2

DIOPT Version :10

Sequence 1:NP_609691.6 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster
Sequence 2:XP_073788193.1 Gene:lama2 / 100049705 ZFINID:ZDB-GENE-060119-1 Length:3211 Species:Danio rerio


Alignment Length:228 Identity:60/228 - (26%)
Similarity:90/228 - (39%) Gaps:78/228 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 CCQGYEGNLSDSQATCKPICRGGCGRGSCVMPDI-------------------C-SCEEGYIGKH 156
            |..|:.|.:......|||          |..|.:                   | :|.|||.|||
Zfish  1515 CAAGFYGVVRGFTDDCKP----------CACPLLNPENNFSPTCQTEGFNEYRCTACPEGYEGKH 1569

  Fly   157 CTQRC------DHDRWGLDCKNLCQCQ-NGA---ACDNKSGLCHCIAGWTGQFCELPCPQ----G 207
            | :||      |....|..|:. |:|. .||   |||::||.|.|..|.:|..|: .|.:    |
Zfish  1570 C-ERCAPGFHGDPGVLGGRCEE-CKCDPYGAFPSACDSRSGQCQCRPGASGLKCD-QCMERHVCG 1631

  Fly   208 TYGIMCRKACDCDEKPCNPQTGACIQQDQPLQLNVSHVIVETVNSTLEKMGIIPRPTTPVPLPEV 272
            ..||:   :||.|   |   .|..|:..:.|..     ::.:||.||           |:|||..
Zfish  1632 PEGIV---SCDDD---C---AGLLIRDMERLLR-----LIGSVNLTL-----------PLPLPYK 1671

  Fly   273 IVIKQPTSNENAQH------SPKIIVHQSSSDL 299
            ::.:.....|..:|      :|:.::..:.|:|
Zfish  1672 VLYRFENVTEELKHMLSPQRAPERLMQLADSNL 1704

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NimANP_609691.6 EMI 51..118 CDD:462204 2/5 (40%)
lama2XP_073788193.1 None

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