DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta5R2 and PUP3

DIOPT Version :9

Sequence 1:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_011020.3 Gene:PUP3 / 856830 SGDID:S000000896 Length:205 Species:Saccharomyces cerevisiae


Alignment Length:187 Identity:43/187 - (22%)
Similarity:78/187 - (41%) Gaps:16/187 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 GGIIL------CV----DSRATSGKLIGSQSIHKVVQVNQYIMGTTAGGAADCTYWDRALTRECR 135
            |||::      ||    |.|..|..|..|....|:.......:|.| |.|.|.|..:.....:..
Yeast     9 GGIVVAMTGKDCVAIACDLRLGSQSLGVSNKFEKIFHYGHVFLGIT-GLATDVTTLNEMFRYKTN 72

  Fly   136 LHELRYKERLPVQSAAKYISNVAAEYKGMGLCMGMMLAGWSPEG--PSLVYVDSNGLRIHGKLFA 198
            |::|:.:..:..::..:.:|:...|.:.....:|.::||.:.:.  |.:...|..|.....|.|.
Yeast    73 LYKLKEERAIEPETFTQLVSSSLYERRFGPYFVGPVVAGINSKSGKPFIAGFDLIGCIDEAKDFI 137

  Fly   199 V-GSGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDIFS--GGVVRLYHMDQ 252
            | |:.:....|:.:|.|..:|...:.::....|:.:|...|..|  |.||.:...|:
Yeast   138 VSGTASDQLFGMCESLYEPNLEPEDLFETISQALLNAADRDALSGWGAVVYIIKKDE 194

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 43/187 (23%)
proteasome_beta_type_5 72..259 CDD:239730 43/187 (23%)
PUP3NP_011020.3 proteasome_beta_type_3 8..201 CDD:239728 43/187 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.