DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosbeta5R2 and PRE9

DIOPT Version :9

Sequence 1:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_011651.3 Gene:PRE9 / 853036 SGDID:S000003367 Length:258 Species:Saccharomyces cerevisiae


Alignment Length:193 Identity:47/193 - (24%)
Similarity:78/193 - (40%) Gaps:34/193 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QIDF-----DHGTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQVNQYIMGTTAGGAADCT 124
            |:::     .|..|.:|.:...||:|..:.:.||..|....|..|:.::|..|....||..||. 
Yeast    21 QVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADA- 84

  Fly   125 YWDRALTRECRLHELR----YKERLPVQSAAKYISNVAAEYKGMGLCMGMMLAGWSPEGPSLVYV 185
               ..|....|:|...    |.|.:||:...:.:|::...|...|        |..|.|.|.:|.
Yeast    85 ---EILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHG--------GLRPFGVSFIYA 138

  Fly   186 ---DSNGLRIH----------GKLFAVGSGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHAT 235
               |..|.:::          .|..:||:....|..:|..||:.|:..::|.:||...:...|
Yeast   139 GYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKDDMKVDDAIELALKTLSKTT 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 47/193 (24%)
proteasome_beta_type_5 72..259 CDD:239730 45/181 (25%)
PRE9NP_011651.3 proteasome_alpha_type_4 4..216 CDD:239721 47/193 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.