DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R2 and psmb8f

DIOPT Version :9

Sequence 1:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001017791.1 Gene:psmb8f / 550488 ZFINID:ZDB-GENE-050417-319 Length:277 Species:Danio rerio


Alignment Length:288 Identity:116/288 - (40%)
Similarity:171/288 - (59%) Gaps:35/288 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALESICGMDKL------------------PFMKSFGYRTSKQTIEEIRVASSNMDNPLAIMAPP 47
            |||..:|...:|                  |...:||..|::..:      .:.|| |...:.|.
Zfish     1 MALMDVCLSSELKQSCFTANAWQSEPTTCGPSHYTFGLNTNELAV------PTGMD-PEQFLGPL 58

  Fly    48 YENPRESVKKLNALSEVQIDFDHGTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQVNQYI 112
            .|..          |:::|:|.|||||:.|.:|.|:::.|||||::|..|.::...||:::|.|:
Zfish    59 TEGD----------SDIKIEFLHGTTTLAFKFQHGVMVAVDSRASAGSYIDTKDFKKVIEINPYL 113

  Fly   113 MGTTAGGAADCTYWDRALTRECRLHELRYKERLPVQSAAKYISNVAAEYKGMGLCMGMMLAGWSP 177
            :||.:|.||||.||:|.|.:|||:::||.|.|:.|.:|:|.::|:.|||:||||.||.|:.||..
Zfish   114 LGTMSGNAADCVYWERRLAKECRIYKLRNKTRISVAAASKLLANMVAEYRGMGLSMGTMVCGWDQ 178

  Fly   178 EGPSLVYVDSNGLRIHGKLFAVGSGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDIFSG 242
            .||.|.||.|:|.|:.|.:|:.|||...|.|::||.:|.||:..||||||..|:||||..|.:||
Zfish   179 RGPGLYYVSSSGTRLAGDMFSTGSGCNYAYGVMDSGHRWDLTVPEAYDLAERAIYHATHRDAYSG 243

  Fly   243 GVVRLYHMDQGNWRNVANKDCQELHEQY 270
            |||.:|||.:..|..|:..|..:||.:|
Zfish   244 GVVNMYHMQKEGWIKVSQNDVGDLHHKY 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 104/225 (46%)
proteasome_beta_type_5 72..259 CDD:239730 92/186 (49%)
psmb8fNP_001017791.1 PTZ00488 38..274 CDD:185666 108/251 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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