DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R2 and psmb11a

DIOPT Version :9

Sequence 1:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001007179.1 Gene:psmb11a / 446135 ZFINID:ZDB-GENE-040724-32 Length:375 Species:Danio rerio


Alignment Length:356 Identity:99/356 - (27%)
Similarity:157/356 - (44%) Gaps:104/356 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALESICGMDKLPFMKSFGYRTSKQTIEEIRVASSNMDNPLAIM-APPYENPRE----------- 53
            |||:.:||     |.::|....|          ||...|.:..| ..|:|..||           
Zfish     1 MALQDVCG-----FTETFDDTNS----------SSYQPNEMGYMWRTPFEFDRESSFNFHLPAQQ 50

  Fly    54 SVKKLNALS---------EVQIDFDHGTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQVN 109
            |.:|..|.:         |......|||||:||::|.|:|...|:||:...|:.....||::.::
Zfish    51 SCRKNTASTLFSSTLSPHEQPFHLSHGTTTLGFIFQDGVIAAADTRASCKGLVCCPITHKIMPIH 115

  Fly   110 QYIMGTTAGGAADCTYWDRALTRECRLHELRYKERLPVQSAAKYISNVAAEYKGMGLCMGMMLAG 174
            .:::..|:|..|||..|:|.||||.||::||::.||.:..|||.:|.:...:||..:|:...|.|
Zfish   116 SHLVVNTSGSGADCMLWERILTREMRLYQLRHRTRLSINGAAKLLSTMLHPFKGTNVCVAATLCG 180

  Fly   175 WSPE------------------------------------------------------------- 178
            |..|                                                             
Zfish   181 WDGEESQIQWKTSMGTVNVNESMAQDSTLSAISDESALGSEKRASISEQEEILKDVPDQQNRSTF 245

  Fly   179 ----GPSLVYVDSNGLRIHGKLFAVGSGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDI 239
                ||.:.||.|:||:::|::.:||||:|.|..:||..:|..::.:||..||..||:.||..|.
Zfish   246 GGRFGPRVCYVCSDGLQLNGEIISVGSGSPYAYAVLDDGWRWGMTVDEAVGLAREAVFRATHWDA 310

  Fly   240 FSGGVVRLYHMDQGNWRNVANKDCQELHEQY 270
            :||..|.|:::....||   .::.::|.|:|
Zfish   311 YSGNNVDLFYITARGWR---RREREDLKEEY 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 87/310 (28%)
proteasome_beta_type_5 72..259 CDD:239730 74/251 (29%)
psmb11aNP_001007179.1 20S_bact_beta 76..334 CDD:163402 76/260 (29%)
proteasome_beta_type_5 78..330 CDD:239730 74/254 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D396507at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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