DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R2 and psmb1

DIOPT Version :9

Sequence 1:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001003889.1 Gene:psmb1 / 445413 ZFINID:ZDB-GENE-040618-2 Length:237 Species:Danio rerio


Alignment Length:209 Identity:40/209 - (19%)
Similarity:69/209 - (33%) Gaps:56/209 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 FVYQGGIILCV----------DSRATSGKLIGSQSIHKVVQVNQYIMGTTAGGAADCTYWDRALT 131
            :.:.||.:|.|          |:|.:.|..|.|:...|..::....:...:|...||.    .||
Zfish    29 YAFNGGTVLAVAGEDFAIVASDTRLSEGYSIHSRDSPKCYKLTDTTVLGCSGFHGDCL----TLT 89

  Fly   132 R--ECRLHELRYKERLPVQSAA----------------KYISNVAAEYKGMGLCMGMMLAGWSPE 178
            :  |.||...::.....:.|.|                .|:.|:              :.|...|
Zfish    90 KIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNI--------------IGGLDEE 140

  Fly   179 GPSLVY-VDSNGLRIHGKLFAVGSGAPNALGILDSDY---------RLDLSDNEAYDLAFLAVYH 233
            |...|| .|..|........|.||.:.....:||:..         .:.|:..:|..|.......
Zfish   141 GRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEHVPLTQEKAVQLVKDVFIS 205

  Fly   234 ATMTDIFSGGVVRL 247
            |...|:::|..:::
Zfish   206 AAERDVYTGDALKV 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 40/209 (19%)
proteasome_beta_type_5 72..259 CDD:239730 40/209 (19%)
psmb1NP_001003889.1 PRE1 22..237 CDD:223711 40/209 (19%)
proteasome_beta_type_1 26..237 CDD:239726 40/209 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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