DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R2 and psmb10

DIOPT Version :9

Sequence 1:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_001002543.2 Gene:psmb10 / 436816 ZFINID:ZDB-GENE-040718-278 Length:276 Species:Danio rerio


Alignment Length:218 Identity:57/218 - (26%)
Similarity:90/218 - (41%) Gaps:33/218 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 YENPRESVKKLNALSEVQIDFDH----GTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKV--V 106
            :||.|.:......|||......:    |||..|.|::.|:||..|:|||...::..::..|:  :
Zfish    15 FENTRRNAVLEANLSEKGYSAPNARKTGTTIAGLVFKDGVILGADTRATDDMVVADKNCMKIHYI 79

  Fly   107 QVNQYIMGTTAGGAADCTYWDRALTRECRLHELRYKERLPVQSAAKYISNVAAEYKGMGLCMGMM 171
            ..|.|..|  ||.|||.....:.::....||.|.......|....:.:..:...|:|        
Zfish    80 APNIYCCG--AGVAADAEVTTQMMSSNVELHSLSTGRPPLVAMVTRQLKQMLFRYQG-------- 134

  Fly   172 LAGWSPEGPSLVY--VDSNGLRI-----HGK-----LFAVGSGAPNALGILDSDYRLDLSDNEAY 224
                 ..|.||:.  ||.||.::     ||.     ...:||||.:|:.:.:..|:.::...||.
Zfish   135 -----HIGSSLIVGGVDVNGAQLYSVYPHGSYDKLPFLTMGSGAASAISVFEDRYKPNMELEEAK 194

  Fly   225 DLAFLAVYHATMTDIFSGGVVRL 247
            .|...|:......|:.||..|.|
Zfish   195 QLVRDAITAGIFCDLGSGSNVDL 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 57/218 (26%)
proteasome_beta_type_5 72..259 CDD:239730 50/190 (26%)
psmb10NP_001002543.2 PRE1 40..224 CDD:223711 51/193 (26%)
proteasome_beta_type_7 43..231 CDD:239732 50/190 (26%)
Pr_beta_C 237..270 CDD:289249
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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