DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R2 and Prosalpha6T

DIOPT Version :10

Sequence 1:NP_724081.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_609623.1 Gene:Prosalpha6T / 34726 FlyBaseID:FBgn0032492 Length:289 Species:Drosophila melanogaster


Alignment Length:178 Identity:40/178 - (22%)
Similarity:70/178 - (39%) Gaps:24/178 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 YENPRESVKKLNALSEVQIDFD---HGTTTVGFV---YQGGIILCVDSRATSGKLIGSQSIHKVV 106
            |:|...:......|.:|:...:   .|..|||..   |.....||..|:.|      :....|::
  Fly     6 YDNDTTTWSPQGRLFQVEYAMEAVKQGAATVGLKGTDYAVLAALCRTSKDT------NTLQRKIM 64

  Fly   107 QVNQYIMGTTAGGAAD----CTYWDRALTRECRLHELRYKERLPVQSAAKYISN----VAAEYKG 163
            .|:.::..:.||..||    |.|    :..||..:...|....||:.....:.|    ....|..
  Fly    65 PVDDHVGMSIAGLTADARVVCQY----MRTECMAYRHSYNAEFPVRRLVSNLGNKLQTTTQRYDR 125

  Fly   164 MGLCMGMMLAGWSPEGPSLVYVDSNGLRIHGKLFAVGSGAPNALGILD 211
            ....:|:::||:..:||.:..|......::.|..|:||.:.:|...|:
  Fly   126 RPYGVGLLVAGYDEQGPHIYQVMPTANVLNCKAMAIGSRSQSARTYLE 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_724081.1 proteasome_beta_type_5 72..259 CDD:239730 35/151 (23%)
Prosalpha6TNP_609623.1 proteasome_alpha_type_1 6..215 CDD:239718 40/178 (22%)

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