DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R2 and psmb8a

DIOPT Version :10

Sequence 1:NP_724081.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_571467.3 Gene:psmb8a / 30666 ZFINID:ZDB-GENE-990415-141 Length:271 Species:Danio rerio


Alignment Length:283 Identity:116/283 - (40%)
Similarity:169/283 - (59%) Gaps:30/283 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALESICGMDKLPFMKSFGYRTSKQTI-------------EEIRVASSNMDNPLAIMAPPYENPR 52
            |||..:.|. |......||:   |||:             :|..|       |:.:      :|.
Zfish     1 MALLDVSGY-KYNSASQFGF---KQTLLDRSNHYSFGTKCQEFAV-------PVGV------DPS 48

  Fly    53 ESVKKLNALSEVQIDFDHGTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQVNQYIMGTTA 117
            :.:|..:....|.||.:|||||:.|.::.|:|:.|||||::||.|.|:..:||:::|.|::||.:
Zfish    49 KFLKSCSCEDGVCIDLNHGTTTLAFKFRHGVIVAVDSRASAGKYIASKEANKVIEINPYLLGTMS 113

  Fly   118 GGAADCTYWDRALTRECRLHELRYKERLPVQSAAKYISNVAAEYKGMGLCMGMMLAGWSPEGPSL 182
            |.||||.||:|.|.:||||::||.|:|:.|.:|:|.:||:...|:||||.||.|:.||..:||.|
Zfish   114 GSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLSNMMLGYRGMGLSMGSMICGWDKQGPGL 178

  Fly   183 VYVDSNGLRIHGKLFAVGSGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDIFSGGVVRL 247
            .|||.||.|:.|::|:.|.|...|.|::||.||.|::..|||:|....:.|||..|.:|||||.|
Zfish   179 YYVDDNGTRLSGRMFSTGCGNSYAYGVVDSGYREDMTVEEAYELGRRGIAHATHRDAYSGGVVNL 243

  Fly   248 YHMDQGNWRNVANKDCQELHEQY 270
            |||.:..|..|..:|..||..:|
Zfish   244 YHMQEDGWIKVCKEDVSELIHRY 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_724081.1 proteasome_beta_type_5 72..259 CDD:239730 91/186 (49%)
psmb8aNP_571467.3 proteasome_beta_type_5 68..255 CDD:239730 91/186 (49%)

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