DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R2 and Psmb2

DIOPT Version :9

Sequence 1:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_058980.1 Gene:Psmb2 / 29675 RGDID:61874 Length:201 Species:Rattus norvegicus


Alignment Length:153 Identity:36/153 - (23%)
Similarity:65/153 - (42%) Gaps:16/153 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 ILCVDSRATSGKLIGSQSIH-KVVQVNQYIMGTTAGGAADCTYWDRALTRECRLHELRYKERLPV 147
            :|....|..:..::..:..| |:.::::.|:....|.|.|...:...:.:..:|:::|....|..
  Rat    13 VLVASDRVAASNIVQMKDDHDKMFKMSEKILLLCVGEAGDTVQFAEYIQKNVQLYKMRNGYELSP 77

  Fly   148 QSAAKYISNVAAEYKGMGLCM--------GMMLAGWSP-EGPSLVYVDSNGLRIHGKLFAVGSGA 203
            .:||.:.....|:      |:        .::|||:.. |||:|.|:|...........|.|.||
  Rat    78 TAAANFTRRNLAD------CLRSRTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGA 136

  Fly   204 PNALGILDSDYRLDLSDNEAYDL 226
            ...|.|||..|...:|...|.:|
  Rat   137 FLTLSILDRYYTPTISRERAVEL 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 36/153 (24%)
proteasome_beta_type_5 72..259 CDD:239730 36/153 (24%)
Psmb2NP_058980.1 proteasome_beta_type_2 1..192 CDD:239727 36/153 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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