DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R2 and Psmb8

DIOPT Version :10

Sequence 1:NP_724081.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_542945.2 Gene:Psmb8 / 24968 RGDID:3426 Length:276 Species:Rattus norvegicus


Alignment Length:281 Identity:117/281 - (41%)
Similarity:170/281 - (60%) Gaps:21/281 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALESICGMDKLPFMKSFGYRTSKQTIEEIRVASSNMDNP----LAIMAPPYENPR--ESVKKLN 59
            |||..:||..:       |.|.....::   ..|....:|    .::.||....||  :..:.|.
  Rat     1 MALLDLCGAPR-------GQRPEWAAVD---AGSGLRSDPGHYSFSVQAPELALPRGMQPTEFLR 55

  Fly    60 ALSE-----VQIDFDHGTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQVNQYIMGTTAGG 119
            :..:     |||:..|||||:.|.:|.|:|:.|||||::|..|.:..::||:::|.|::||.:|.
  Rat    56 SFGDDQERKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGC 120

  Fly   120 AADCTYWDRALTRECRLHELRYKERLPVQSAAKYISNVAAEYKGMGLCMGMMLAGWSPEGPSLVY 184
            ||||.||:|.|.:||||:.||..||:.|.:|:|.:||:..:|:||||.||.|:.||..:||.|.|
  Rat   121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYY 185

  Fly   185 VDSNGLRIHGKLFAVGSGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDIFSGGVVRLYH 249
            ||.||.|:.|::|:.|||...|.|::||.||.|||..||||||..|:.:||..|.:|||||.:||
  Rat   186 VDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVVNMYH 250

  Fly   250 MDQGNWRNVANKDCQELHEQY 270
            |.:..|..|.:.|..:|..:|
  Rat   251 MKKDGWVKVESTDVSDLLHKY 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_724081.1 proteasome_beta_type_5 72..259 CDD:239730 94/186 (51%)
Psmb8NP_542945.2 proteasome_beta_type_5 73..260 CDD:239730 94/186 (51%)

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