DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R2 and Psmb8

DIOPT Version :9

Sequence 1:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_542945.2 Gene:Psmb8 / 24968 RGDID:3426 Length:276 Species:Rattus norvegicus


Alignment Length:281 Identity:117/281 - (41%)
Similarity:170/281 - (60%) Gaps:21/281 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALESICGMDKLPFMKSFGYRTSKQTIEEIRVASSNMDNP----LAIMAPPYENPR--ESVKKLN 59
            |||..:||..:       |.|.....::   ..|....:|    .::.||....||  :..:.|.
  Rat     1 MALLDLCGAPR-------GQRPEWAAVD---AGSGLRSDPGHYSFSVQAPELALPRGMQPTEFLR 55

  Fly    60 ALSE-----VQIDFDHGTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQVNQYIMGTTAGG 119
            :..:     |||:..|||||:.|.:|.|:|:.|||||::|..|.:..::||:::|.|::||.:|.
  Rat    56 SFGDDQERKVQIEMAHGTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGC 120

  Fly   120 AADCTYWDRALTRECRLHELRYKERLPVQSAAKYISNVAAEYKGMGLCMGMMLAGWSPEGPSLVY 184
            ||||.||:|.|.:||||:.||..||:.|.:|:|.:||:..:|:||||.||.|:.||..:||.|.|
  Rat   121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYY 185

  Fly   185 VDSNGLRIHGKLFAVGSGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDIFSGGVVRLYH 249
            ||.||.|:.|::|:.|||...|.|::||.||.|||..||||||..|:.:||..|.:|||||.:||
  Rat   186 VDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVVNMYH 250

  Fly   250 MDQGNWRNVANKDCQELHEQY 270
            |.:..|..|.:.|..:|..:|
  Rat   251 MKKDGWVKVESTDVSDLLHKY 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 107/232 (46%)
proteasome_beta_type_5 72..259 CDD:239730 94/186 (51%)
Psmb8NP_542945.2 PTZ00488 40..271 CDD:185666 106/230 (46%)
proteasome_beta_type_5 73..260 CDD:239730 94/186 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53702
OrthoDB 1 1.010 - - D396507at33208
OrthoFinder 1 1.000 - - FOG0001305
OrthoInspector 1 1.000 - - mtm8992
orthoMCL 1 0.900 - - OOG6_100897
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X647
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.790

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