DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R2 and Psma3

DIOPT Version :9

Sequence 1:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_035314.3 Gene:Psma3 / 19167 MGIID:104883 Length:255 Species:Mus musculus


Alignment Length:236 Identity:42/236 - (17%)
Similarity:91/236 - (38%) Gaps:47/236 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 QIDF-----DHGTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQVNQYIMGTTAGGAADCT 124
            |:::     ::.:|.:|...:.|::..|:....| ||....|..::..|::::....||..||. 
Mouse    23 QVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLS-KLYEEGSNKRLFNVDRHVGMAVAGLLADA- 85

  Fly   125 YWDRALTRECRLHELRYKERLPVQSAAKYISNVAAEY----------KGMGLCMGMMLAGWSP-E 178
               |:|....|.....::.........|::::..|.|          :..| | ..||..:|. :
Mouse    86 ---RSLADIAREEASNFRSNFGYNIPLKHLADRVAMYVHAYTLYSAVRPFG-C-SFMLGSYSAND 145

  Fly   179 GPSLVYVDSNGLRIHGKLFAVGSGAPNALGILDSDYRLDLSDNEAYDLA-----FLAVYHATMTD 238
            |..|..:|.:|:.......|:|.....|...::   :|.:.:....|:.     .:.:.|..:.|
Mouse   146 GAQLYMIDPSGVSYGYWGCAIGKARQAAKTEIE---KLQMKEMTCRDVVKEVAKIIYIVHDEVKD 207

  Fly   239 IFSGGVVRLYHMDQGNW--------RNVANKDCQELHEQYS 271
                   :.:.::. :|        ..:..||.:|..|:|:
Mouse   208 -------KAFELEL-SWVGELTKGRHEIVPKDIREEAEKYA 240

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 42/236 (18%)
proteasome_beta_type_5 72..259 CDD:239730 36/210 (17%)
Psma3NP_035314.3 proteasome_alpha_type_3 5..217 CDD:239720 36/211 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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