DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosbeta5R2 and Psmb8

DIOPT Version :9

Sequence 1:NP_001286022.1 Gene:Prosbeta5R2 / 318924 FlyBaseID:FBgn0051742 Length:279 Species:Drosophila melanogaster
Sequence 2:NP_034854.2 Gene:Psmb8 / 16913 MGIID:1346527 Length:276 Species:Mus musculus


Alignment Length:281 Identity:118/281 - (41%)
Similarity:166/281 - (59%) Gaps:21/281 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALESICGMDKLPFMKSFGYRTSKQTIEEIRVASSNMDNP----LAIMAPPYENPR--ESVKKLN 59
            |||..:||..:       |.|.....::   ..|....:|    .:..||....||  :....|.
Mouse     1 MALLDLCGAAR-------GQRPEWAALD---AGSGGRSDPGHYSFSAQAPELALPRGMQPTAFLR 55

  Fly    60 ALS-----EVQIDFDHGTTTVGFVYQGGIILCVDSRATSGKLIGSQSIHKVVQVNQYIMGTTAGG 119
            :..     .|||:..|||||:.|.:|.|:|:.||||||:|..|.|..::||:::|.|::||.:|.
Mouse    56 SFGGDQERNVQIEMAHGTTTLAFKFQHGVIVAVDSRATAGSYISSLRMNKVIEINPYLLGTMSGC 120

  Fly   120 AADCTYWDRALTRECRLHELRYKERLPVQSAAKYISNVAAEYKGMGLCMGMMLAGWSPEGPSLVY 184
            ||||.||:|.|.:||||:.||..||:.|.:|:|.:||:..:|:||||.||.|:.||..:||.|.|
Mouse   121 AADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYY 185

  Fly   185 VDSNGLRIHGKLFAVGSGAPNALGILDSDYRLDLSDNEAYDLAFLAVYHATMTDIFSGGVVRLYH 249
            ||.||.|:.|::|:.|||...|.|::||.||.|||..|||||...|:.:||..|.:|||||.:||
Mouse   186 VDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYH 250

  Fly   250 MDQGNWRNVANKDCQELHEQY 270
            |.:..|..|.:.|..:|..:|
Mouse   251 MKEDGWVKVESSDVSDLLYKY 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosbeta5R2NP_001286022.1 PTZ00488 46..279 CDD:185666 108/232 (47%)
proteasome_beta_type_5 72..259 CDD:239730 95/186 (51%)
Psmb8NP_034854.2 PTZ00488 40..271 CDD:185666 107/230 (47%)
proteasome_beta_type_5 73..260 CDD:239730 95/186 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53702
OrthoDB 1 1.010 - - D396507at33208
OrthoFinder 1 1.000 - - FOG0001305
OrthoInspector 1 1.000 - - mtm8748
orthoMCL 1 0.900 - - OOG6_100897
Panther 1 1.100 - - O PTHR11599
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X647
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.790

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