DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm4B and Phf14

DIOPT Version :9

Sequence 1:NP_001260942.1 Gene:Kdm4B / 318918 FlyBaseID:FBgn0053182 Length:717 Species:Drosophila melanogaster
Sequence 2:XP_006505259.1 Gene:Phf14 / 75725 MGIID:1923539 Length:946 Species:Mus musculus


Alignment Length:215 Identity:47/215 - (21%)
Similarity:80/215 - (37%) Gaps:34/215 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   353 LPPHLDVLLCDKKMKKQC--NPTKAKSFKERNPDLDLDEIQQNPNVPDDVKAMLKESVLTLDTGD 415
            :|....::..:||.:::.  .|.|.|. ||:..:.:.::.::...|.|...|  ..:..|..|..
Mouse    89 MPSDKQLIKMEKKEEEENGERPRKKKE-KEKEKEKEREKDKEKATVSDSAAA--SAAGTTPATSP 150

  Fly   416 LATDEADFP------NEDAMSLQSPANLKTKQELLEYID----DGTEDDDEEED-------FKRR 463
            .|......|      .|:.:|.....||:..:.||:::.    :..:|.|.|:|       .||:
Mouse   151 PAVTSPSVPTTTTTTTEEQVSEPKKWNLRRNRPLLDFVSMEELNAMDDYDSEDDNDWRPTVVKRK 215

  Fly   464 ----KQKRRYDADYDDDWLASKRKTNSRNNRGRSPRTKDDRSISPASSTSSTSRGARRGKASGTP 524
                .||...|.|.:||...........|:.|     .|:...||||......   :|.|.....
Mouse   216 GRSASQKEGSDGDNEDDDDEGSGSEEDENDEG-----NDEDHSSPASEAGGKK---KRSKVLSRN 272

  Fly   525 RKTPARRKKDSITTSPAVSS 544
            .........||:|.|.:.|:
Mouse   273 SADDEELTNDSLTLSQSKSN 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm4BNP_001260942.1 JmjN 11..44 CDD:280526
JmjC 173..289 CDD:202224
Phf14XP_006505259.1 PHD1_PHF14 314..370 CDD:277036
ePHD_PHF14 378..491 CDD:277144
PHD2_PHF14 720..769 CDD:277037
PHD3_PHF14 863..911 CDD:277038
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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