DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm4B and mllt10

DIOPT Version :9

Sequence 1:NP_001260942.1 Gene:Kdm4B / 318918 FlyBaseID:FBgn0053182 Length:717 Species:Drosophila melanogaster
Sequence 2:XP_017209395.2 Gene:mllt10 / 492342 ZFINID:ZDB-GENE-041114-176 Length:1162 Species:Danio rerio


Alignment Length:311 Identity:67/311 - (21%)
Similarity:108/311 - (34%) Gaps:88/311 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   448 DDGTEDDDEEEDFKRRKQKRR----------------------------YDADYDDDWLASKRKT 484
            |..|...|:..|.:::|.|.|                            |:.......::|...|
Zfish   284 DSSTHSLDKHHDKEKKKHKERDRHKPKHKKPLELSPSLVPALMVTPEKSYNNSSSGGSVSSISST 348

  Fly   485 NSR-NNRGRSPRTKDDRSISPASSTSSTSRGARRGKASGTPRKTPARRKKDSITTSPAVSS---A 545
            ..| ::.|......:.:.:.|.||:||...|:..||:|      .::.||.|.:||.:..|   .
Zfish   349 QKRLDDSGARFTNANFQEVPPHSSSSSKDGGSSDGKSS------DSKSKKSSHSTSSSSGSRGRK 407

  Fly   546 ATAVKTPTSAVVAGTTSIATTTTPPAD-----GGGDAKKERQSLQFMQQSRKF-EGKIPKLSQTS 604
            :.|.|.....|...|:|.|.::|.|..     |...:.|...|...:|.:..| ....|.|....
Zfish   408 SVAGKPHGPVVTTATSSTAPSSTSPFQQGHLLGSNSSSKSATSGSVVQPTSDFLSFSDPSLRAGD 472

  Fly   605 AAT----------GGATAAAEASTSKSSQGQQQQIVYVNMLPAANTLNGIPQQQQQQQYASTDGN 659
            :.|          |||.:.|..|                 :.|.||.:.||..|     :|:..:
Zfish   473 SYTPPSFGRCHMKGGAESGASES-----------------MVALNTFSMIPLSQ-----SSSSSS 515

  Fly   660 VYQLQNEILCDANGHAVTAATASYQTTASSPQQQQQQQQQQQNVATSVAAT 710
            ....:|   |...|...:.|:|||         ::.|.....:.|||.::|
Zfish   516 SKHYEN---CHTTGELGSLASASY---------KRPQPSSSSSSATSSSST 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm4BNP_001260942.1 JmjN 11..44 CDD:280526
JmjC 173..289 CDD:202224
mllt10XP_017209395.2 PHD_AF10_AF17 50..97 CDD:277049
ePHD_AF10 148..273 CDD:277178
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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