DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm4B and seq

DIOPT Version :10

Sequence 1:NP_001260942.1 Gene:Kdm4B / 318918 FlyBaseID:FBgn0053182 Length:717 Species:Drosophila melanogaster
Sequence 2:NP_001027415.1 Gene:seq / 3772396 FlyBaseID:FBgn0028991 Length:882 Species:Drosophila melanogaster


Alignment Length:125 Identity:122/125 - (97%)
Similarity:123/125 - (98%) Gaps:0/125 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   587 MQQSRKFEGKIPKLSQTSAATGGATAAAEASTSKSSQGQQQQIVYVNMLPAANTLNGIPQQQQQQ 651
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MQQSRKFEGKIPKLSQTSAATGGATAAAEASTSKSSQGQQQQIVYVNMLPAANTLNGIPQQQQQQ 65

  Fly   652 QYASTDGNVYQLQNEILCDANGHAVTAATASYQTTASSPQQQQQQQQQQQNVATSVAATI 711
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||..:
  Fly    66 QYASTDGNVYQLQNEILCDANGHAVTAATASYQTTASSPQQQQQQQQQQQNVATSVADNV 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm4BNP_001260942.1 JmjN 5..50 CDD:128818
JmjC 173..289 CDD:396791
seqNP_001027415.1 C2H2 Zn finger 404..430 CDD:275370
Blue background indicates that the domain is not in the aligned region.

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