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Protein Alignment Kdm4B and lid

DIOPT Version :9

Sequence 1:	NP_001260942.1	Gene:	Kdm4B / 318918	FlyBaseID:	FBgn0053182	Length:	717	Species:	Drosophila melanogaster
Sequence 2:	NP_001245908.1	Gene:	lid / 33837	FlyBaseID:	FBgn0031759	Length:	1838	Species:	Drosophila melanogaster

Alignment Length:	309	Identity:	102/309 - (33%)
Similarity:	149/309 - (48%)	Gaps:	55/309 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    43 VPPPEWVPRRSGYADLDALNVTIPAPICQVVTGKQ---GYYQQINIQKKPLTVKQFSELA---ST 101
            :|..||:               .|..:.:.|:..|   |:.|    .::..|::||.::|   ..
  Fly   485 IPKGEWL---------------CPRCVVEEVSKPQEAFGFEQ----AEREYTLQQFGQMADQFKQ 530

  Fly   102 ERYATPKHF-DFEDLERKYWKNITY----VAPIYGADV------SGSITDT-------DQD---- 144
            |.:..|.|. ..|.:||::|:.::.    |...||||:      ||..|.:       ||:
  Fly   531 EYFRKPVHLVPTEMVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSLYLLPGDQEYAES 595

  Fly   145 SWNINRLGTILDYVNKDYNIQIDGVNTAYLYFGMWKTTFAWHTEDMDLYSINYLHFGAPKTWYVV 209
            |||:|.|..:.|.:....|..|.|:|..::|.||....|.||.||...|||||||:|.|||||.|
  Fly   596 SWNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGV 660

  Fly   210 PPECGRKLEKVANQYFPASYKNCNAYLRHKMTLISPQILKQHDVPVSKITQEAGEIMITFPFGYH 274
            |..|..:.|:...|..|..:.:....|...:|:::|.||..:.|||.:..|.|||.:||||..||
  Fly   661 PGSCAEQFEETMKQAAPELFSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYH 725

  Fly   275 AGFNHGFNCAESTNFAMERWIEYGKRAVQ--------CTCSNDMVKISM 315
            ||||.|:|.||:.|||...|::.|:..|.        |..|:|.:...|
  Fly   726 AGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKM 774

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.