DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kdm4B and Mllt10

DIOPT Version :9

Sequence 1:NP_001260942.1 Gene:Kdm4B / 318918 FlyBaseID:FBgn0053182 Length:717 Species:Drosophila melanogaster
Sequence 2:XP_006497436.2 Gene:Mllt10 / 17354 MGIID:1329038 Length:1101 Species:Mus musculus


Alignment Length:434 Identity:91/434 - (20%)
Similarity:156/434 - (35%) Gaps:125/434 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   363 DKKMKKQCNPTKAKSFKERNPDLDLDEIQQNPNVPDDVKAMLKESVLTLDTGDLATDEADFPN-- 425
            ||..:|:     .|.:||::     ...|::...|:...|::....:|.:....:|.......  
Mouse   225 DKHHEKE-----KKKYKEKD-----KHKQKHKKQPEPSPALVPSLTVTTEKTYTSTSNNSISGSL 279

  Fly   426 ---EDAMSLQSPANLKTKQELLEYIDDGTEDDDEEEDFKRRKQKRRYDADYDDDWLASKRKTNSR 487
               ||..:..:.||.   ||:..:...|  .|..|......|.|              |...:|.
Mouse   280 KRLEDTAARFTNANF---QEVSAHTSSG--KDVSEARGSEGKGK--------------KSSAHSS 325

  Fly   488 NNRGRSPRTKDDRSISPASSTSSTSRGARRGKASGTPRK------------------TPARRKKD 534
            ..|||.|    ....:|.::.|::| ...:|..||||..                  |.:..:.|
Mouse   326 GQRGRKP----GAGRNPGTAVSASS-PFPQGSFSGTPGSVKSSSGSSVQSPQDFLSFTDSDLRSD 385

  Fly   535 SIT------------------TSPAVSSAATAVKTP-TSAVVA------------GTTSIATTTT 568
            |.|                  ...||:|.::.|..| ||.|::            |::|:.|...
Mouse   386 SYTHTQQPSSTKDVHKGESGSQEAAVNSFSSLVGHPVTSTVISQPKSFDNSPGELGSSSLPTAGY 450

  Fly   569 PPADGGG---DAKKERQSLQFMQQSRKFEGKIPK----------LSQTSAATGGATAAAEASTSK 620
            ..|...|   :|.||::. :..:||:...|: ||          ||.:||:...:.|:|..|.:.
Mouse   451 KRAQTSGIEEEAVKEKKR-KGNKQSKHGPGR-PKGNKNQENVSHLSVSSASPTSSVASAAGSVTS 513

  Fly   621 SS--------QGQQQQIVYVNMLPAANTLNGIPQQQQQQQYASTDGNVYQLQNEI---LCDANGH 674
            ||        :....|.:.|...|..:.::    .|.:...|.......:|.|.|   :.::|..
Mouse   514 SSLQKSPTLLRNGSLQSLSVGSSPVGSEIS----MQYRHDGACPTTTFSELLNAIHNGIYNSNDV 574

  Fly   675 AVT-----AATASYQTTASS--PQQQQQQQQQQQNVATSVAATI 711
            ||:     :.:.|....:||  |||.....||...::.|.|:::
Mouse   575 AVSFPNVVSGSGSSTPVSSSHIPQQSSGHLQQVGALSPSAASSV 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kdm4BNP_001260942.1 JmjN 11..44 CDD:280526
JmjC 173..289 CDD:202224
Mllt10XP_006497436.2 PHD_AF10_AF17 24..71 CDD:277049
ePHD_AF10 78..206 CDD:277178
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5141
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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