DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir31a and grik5-like.1

DIOPT Version :9

Sequence 1:NP_001260346.1 Gene:Ir31a / 318912 FlyBaseID:FBgn0051718 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001072565.1 Gene:grik5-like.1 / 780020 XenbaseID:XB-GENE-5860197 Length:479 Species:Xenopus tropicalis


Alignment Length:507 Identity:111/507 - (21%)
Similarity:181/507 - (35%) Gaps:158/507 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 GLTLRGAS--VIDKEDIISNEQ------IESILSRP---TKDAGVAAFIKYHYELLGLLRER--F 254
            |.|..|.|  .|.||...|..|      :.:|:.:|   ..::|:..|.   .:||..|.:.  |
 Frog    17 GCTDAGESKGSIHKEKERSKRQALKHLTVTTIMEQPFSMKTESGMEGFC---IDLLSELAQSLGF 78

  Fly   255 NFTV-NFRNSR-GWAGRLGNTTFRLGLLGIVMRNEADIAASGAFNRINRFAEFDTIHQSWKFETA 317
            |:|: ..::.| |...:.||..   |::|.|:|.|||:|.:..           ||..:.:.|.|
 Frog    79 NYTIKEVKDGRYGAKDQDGNWN---GMVGEVLRKEADLAVAPL-----------TITGARERELA 129

  Fly   318 FLYRY----------TSDLDTHGKSGNFLSPFSDRVWL----------FCLLTLGAFS-IIWVLF 361
            |...:          ..|:..:.....||:|||...|:          .||..:|..| ..|.  
 Frog   130 FTKPFMQTGISILLRKDDVSENSYLFGFLTPFSKETWIGILVAYVVTSLCLFLVGRLSPCEWT-- 192

  Fly   362 EIIDYKILRIRVNSQKLEHLNQKSSVICIKTTCIERILQTFGACCQQGLDPNPVDRSVRFLVMTL 426
                    .:.........||.              :....||...||.:|:|...|.|.:.:..
 Frog   193 --------ELSTEQNNFNFLNS--------------LWFGVGAFTLQGAEPHPKSVSARIIAVIW 235

  Fly   427 FLFSLVMYNYYTSSVVGGLLSSSDQGPSTVDEITASPLKISFEDIGYYKVL-------------F 478
            ::||:|:...|.:|....|.|.|.|..:..          :|||:...:.|             |
 Frog   236 WIFSIVLVAAYIASFAAFLNSDSMQTTNIQ----------TFEDLVNQRTLEFGTINSSSTFQFF 290

  Fly   479 RESQN---RSITRLIEKKLSSSRSLNELPIFSHIEDAVPYLKAGGFAF-------------HCEV 527
            :.|:|   |.|...::|:      .:||.:.|..| .|..:|...:||             ||::
 Frog   291 KNSKNPTYRMIYEYMDKR------KDELLVKSFAE-GVRRVKESNYAFLGESVMQDIMVAKHCDL 348

  Fly   528 VDAYPVIS--EYFDANEICDLREVSGLMEVEILNWILHKNSQYTEIFKTAMCNAQEKGFVERILR 590
            |.|..:|:  .|..|..:                     :|...:....|:....|.|.:| .||
 Frog   349 VRAPQIIAGRGYGIAASL---------------------DSPLIKPLSVAILEQTESGNIE-YLR 391

  Fly   591 RR------QIKKPACQSLYTVYPVSLSGVLPGFVILICGFGASLLLLCLEKV 636
            ::      .:|:.|  ....|.|.:|.|:   |:||..|....::...:|.|
 Frog   392 KKWWDNTCNMKRSA--GWNPVQPHTLGGI---FLILGIGLALGVIAALVELV 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir31aNP_001260346.1 Lig_chan 401..624 CDD:278489 58/259 (22%)
grik5-like.1NP_001072565.1 PBP2_iGluR_non_NMDA_like 41..396 CDD:270403 90/434 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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