DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir31a and grik1b

DIOPT Version :9

Sequence 1:NP_001260346.1 Gene:Ir31a / 318912 FlyBaseID:FBgn0051718 Length:648 Species:Drosophila melanogaster
Sequence 2:XP_690040.5 Gene:grik1b / 561540 ZFINID:ZDB-GENE-070821-1 Length:906 Species:Danio rerio


Alignment Length:801 Identity:148/801 - (18%)
Similarity:265/801 - (33%) Gaps:218/801 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LAAGEGEII-PSMEESV--VTNFVKSL-------------VKTKQAIVFSCLFKDFKEISLALMR 60
            ||.|...:. ||...||  |.:...:|             |..|.:...: |:.|:..||.|::.
Zfish   127 LALGVAAVFGPSHSSSVSAVQSICNALEVPHIQTRWKHPSVDNKDSFYIN-LYPDYASISRAVLD 190

  Fly    61 INQFVSVVNLNQSYSLTSILTR-----ENYARTSVMVNAR--CSGSSE---LLFEASENRYF--- 112
            |.||.....:...|...:.|.|     :..:|.|:.:..|  .:||.:   ||.|..:.:.|   
Zfish   191 IVQFYKWKAVTVVYEDATGLIRLQELIKAPSRYSIKIKIRQLPTGSKDARPLLKEMKKGKEFCVI 255

  Fly   113 ---------------------NKTYQWFLWGVDLEVQSLFPLN-----------LNYVGPN---- 141
                                 .:.|.:|...:||....|.|..           ||...|.    
Zfish   256 FDCSYQTAADVLKQLLSMGMMTEYYHFFFTTLDLYSLDLEPFRYSGVNMTGFRLLNIDNPQVASV 320

  Fly   142 ---------------------------------------------AQITYVNETADGYAYWDIHS 161
                                                         :|||..:.....:..|...|
Zfish   321 VEKWSMERLQAPPKPETGLQDGMMTTEAALMYDAVYMVAAASQRASQITVSSLQCHRHKPWRFGS 385

  Fly   162 KGRHLKSNLEINLIA--TLINDTLNIARDIFHLQSIDFR----------GQFN------------ 202
            :...:....:.|.:.  .:||.|..:.:| |.|..|..:          |:||            
Zfish   386 RFISMFKEAQWNGLTGQIIINKTDGLRKD-FDLDIISLKEDGLEKPLESGRFNKVWKKIGVWNSN 449

  Fly   203 -GLTLRGASVIDKE----DIISNEQ--IESILSRP-----TKDAGVAAFIKYHYELLGLLRE--- 252
             ||.|..::. ||.    |.::|..  :.:||..|     ..|..:....::....|.||:|   
Zfish   450 TGLNLTDSNK-DKNTNVTDSMANRTLIVTTILENPYVMYKKSDKPLYGNDRFEGYCLDLLKELSN 513

  Fly   253 --RFNFTVNF--------RNSRG-WAGRLGNTTFRLGLLGIVMRNEADIAASGAFNRINRFAEFD 306
              .|::.|..        :|.:| |.          |::..::.:.||:|.:.......|....|
Zfish   514 ILGFSYEVKLVTDGKYGAQNDKGEWN----------GMVRELIDHVADLAVAPLTITYVREKVID 568

  Fly   307 TIHQSWKFETAFLYRYTSDLDTHGKSG------NFLSPFSDRVWLFCLLT-LGAFSIIWVLFEII 364
            ..........:.||        |..:|      :||:|.|..:|::.||. ||...:::|:....
Zfish   569 FSKPFMTLGISILY--------HKPNGTNPGVFSFLNPLSPDIWMYVLLACLGVSCVLFVIARFT 625

  Fly   365 DYKILRIRVNSQKLEH-LNQKSSVICIKTTCIERILQTFGACCQQGLDPNPVDRSVRFLVMTLFL 428
            .|:...        .| .|..|.|:....|.|..:....||..|||.:..|...|.|.:....:.
Zfish   626 PYEWYN--------PHPCNPDSDVVENNFTLINSVWFGVGALMQQGSELMPKALSTRIVGGIWWF 682

  Fly   429 FSLVMYNYYTSSVVGGLLSSSDQGPSTVDEITASPLKISFEDI--GYYKVLFRESQNRSITRLIE 491
            |:|::.:.||:::...|.......|....:..|...||.:..:  |.....|::|:    ....|
Zfish   683 FTLIIISSYTANLAAFLTVERMDSPIDSADDLAKQTKIEYGAVRDGSTMTFFKKSK----ISTYE 743

  Fly   492 KKLSSSRSLNELPIFSHIEDAVPYLKAGGFAFHCEVVDAYPVISEYFDANEICDLREVSGLMEVE 556
            |..:...|.....:..:..:.:..:....:|...|....     ||..... |:|.::.||::.:
Zfish   744 KMWAFMSSRKNTALVKNNREGIQRVLTTDYALLMESTSI-----EYISQRN-CNLTQIGGLIDSK 802

  Fly   557 ILNWILHKNSQYTEIFKTAMCNAQEKGFVERILRRRQIKKPAC-----QSLYTVYPVSLSGVLPG 616
            .........|.|.:....|:...||:|.: .:::.:..:...|     :....:...::.|:   
Zfish   803 GYGVGTPIGSPYRDKVTIAILQLQEEGKL-HMMKEKWWRGNGCPEEDSKEASALGVENIGGI--- 863

  Fly   617 FVILICGFGASLLLLCLEKVY 637
            |::|..|...|:.:...|.:|
Zfish   864 FIVLAAGLVLSVFVAIGEFIY 884

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir31aNP_001260346.1 Lig_chan 401..624 CDD:278489 41/229 (18%)
grik1bXP_690040.5 Periplasmic_Binding_Protein_Type_1 62..455 CDD:299141 58/329 (18%)
ANF_receptor 80..423 CDD:279440 53/297 (18%)
Periplasmic_Binding_Protein_Type_2 471..840 CDD:304360 78/405 (19%)
Lig_chan 602..871 CDD:278489 54/290 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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