DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir31a and Ir40a

DIOPT Version :10

Sequence 1:NP_001260346.1 Gene:Ir31a / 318912 FlyBaseID:FBgn0051718 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:731 Identity:141/731 - (19%)
Similarity:248/731 - (33%) Gaps:183/731 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LAAGEGEIIPSMEESV-VTNFVKSLVKTK-QAIVFSCLFKDFKEISLALMRINQFVSVVNLNQSY 74
            ||..:|  :...|.:| :.:|::.|.::. :::|||.....|:.|...|...|:.:|::....:.
  Fly    56 LALSDG--VCQKERNVYLDDFLQRLHRSNYKSVVFSQTELFFQHIEENLQGANECISLILDEPNQ 118

  Fly    75 SLTSILTRENYARTSVMVNARCSGSSELLFEASENRYFNKTYQWFLWGVDLEVQSLFPLNLNYVG 139
            .|.|:..|....|.|:.:                          |.||      :.:|.:...:.
  Fly   119 LLNSLHDRHLGHRLSLFI--------------------------FYWG------ARWPPSSRVIR 151

  Fly   140 PNAQITYVNETADGYAYWDIHSKGRHLKSNLEINLIATLINDTLNIARDIFHLQSIDFRGQFNGL 204
            ....:..|..|......:.|:.......|:.::.|:.....|.|.:.|......::.....|.|.
  Fly   152 FREPLRVVVVTRPRKKAFRIYYNQARPCSDSQLQLVNWYDGDNLGLQRIPLLPTALSVYANFKGR 216

  Fly   205 TLR---------------GASVIDKEDIISNEQIESILSRPT--KDAGVAAFIKYHYELLGLLRE 252
            |.|               ..|..:.|:..|.:.||....|.|  :|          :.||.||.:
  Fly   217 TFRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKVRVTGGRD----------HRLLMLLSK 271

  Fly   253 RFNFTVNFRNSRGWA--------GRLGNTTFRLGLLGIVMRNEA-----DIAASGAFNRINRFAE 304
            ..||...:..:.|..        |:..|.:| .|.:|::...:|     |:..|....:...|: 
  Fly   272 HMNFRFKYIEAPGRTQGSMRSEDGKDSNDSF-TGGIGLLQSGQADFFLGDVGLSWERRKAIEFS- 334

  Fly   305 FDTIHQSWKFETAFLYRYTSDLDTHGKSGNFLSPFSDRVWLFCLLTLGAFSIIWVLFEIIDYKIL 369
            |.|:..|..|.|....|....|       ..:.||...:|...:||:.....|:.....:.| |.
  Fly   335 FFTLADSGAFATHAPRRLNEAL-------AIMRPFKQDIWPHLILTIIFSGPIFYGIIALPY-IW 391

  Fly   370 RIRVNSQKLEHLNQKSSVICIKTTCIERIL--------QTFGACCQQGLDPNPVDRSVRFLVMTL 426
            |.|..:..:|||.:    :.|..|.::.|.        :|..:..|.   |:.:.:...:..:.|
  Fly   392 RRRWANSDVEHLGE----LYIHMTYLKEITPRLLKLKPRTVLSAHQM---PHQLFQKCIWFTLRL 449

  Fly   427 FL--------------FSLVMY----NYYTSSVVGGLLSSSDQGPSTVDEI-TASPLKISFEDIG 472
            ||              |..::|    .|..:.|....|:|....|:....| |...|:.:....|
  Fly   450 FLKQSCNELHNGYRAKFLTIVYWIAATYVLADVYSAQLTSQFARPAREPPINTLQRLQAAMIHDG 514

  Fly   473 YYKVLFRESQNRSITRLIEKKLSSSRSLNELP-----------IFSHIEDAVPYLKAGG------ 520
            |.  |:.|.::.|: .::|......|.|..|.           ....:|..:..:..||      
  Fly   515 YR--LYVEKESSSL-EMLENGTELFRQLYALMRQQVINDPQGFFIDSVEAGIKLIAEGGEDKAVL 576

  Fly   521 -----------------FAFHCEVVDAYPVISEYFDANEICDLREVSGLMEVEILNWILHKNS-- 566
                             |....::...|..::.......:..|..|  ||:: ..:.||.|.:  
  Fly   577 GGRETLFFNVQQYGSNNFQLSQKLYTRYSAVAVQIGCPFLGSLNNV--LMQL-FESGILDKMTAA 638

  Fly   567 ----QYTEIFKTAMCNAQEKGFVERILRRRQIKKPACQSLYTVY------PVSLSGVLPGFVILI 621
                ||.|:..|.:    .||.|       |.|.....|....|      |::|..:...|:.|.
  Fly   639 EYAKQYQEVEATRI----YKGSV-------QAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALG 692

  Fly   622 CGFGASLLLLCLEKVY 637
            .|..|:.::|.||.|:
  Fly   693 VGSLAAGVILLLEIVF 708

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir31aNP_001260346.1 Lig_chan 401..623 CDD:459656 52/286 (18%)
Ir40aNP_610140.4 Lig_chan-Glu_bd <265..336 CDD:463166 16/72 (22%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:473866 22/103 (21%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:473866 24/146 (16%)

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