DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir31a and GRIN2C

DIOPT Version :9

Sequence 1:NP_001260346.1 Gene:Ir31a / 318912 FlyBaseID:FBgn0051718 Length:648 Species:Drosophila melanogaster
Sequence 2:XP_016880033.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1337 Species:Homo sapiens


Alignment Length:598 Identity:109/598 - (18%)
Similarity:180/598 - (30%) Gaps:233/598 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 YAYWDIHS-------KGRHLKSNLEINLIATL------------------INDTLNIARDIFHLQ 193
            |..|..:|       ..|||       .:|||                  :.:|:...|...|..
Human   459 YPVWPRYSASLQPVVDSRHL-------TVATLEERPFVIVESPDPGTGGCVPNTVPCRRQSNHTF 516

  Fly   194 SIDFRGQFNGLTLRGASVIDKEDIISNEQIESILSRPTKDAGVAAFIKYHYELLGLLRERFNFTV 258
            |......:..|..:|..:    ||:..               :|..:|:.|:|..:...:..   
Human   517 SSGDVAPYTKLCCKGFCI----DILKK---------------LARVVKFSYDLYLVTNGKHG--- 559

  Fly   259 NFRNSRG-WAGRLGNTTFRLGLLGIVMRNEADIAASGAFNRINRFAEFDTIHQSWKF-ETAFLYR 321
              :..|| |.|.:|...::          .||:|....  .||. ...:.:..|..| ||.....
Human   560 --KRVRGVWNGMIGEVYYK----------RADMAIGSL--TINE-ERSEIVDFSVPFVETGISVM 609

  Fly   322 YTSDLDTHGKSGNFLSPFSDRVW----LFCL---------------------LTLG------AFS 355
            ......|...|. ||.|:|..||    :.||                     ||.|      ||:
Human   610 VARSNGTVSPSA-FLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTRGKKSGGPAFT 673

  Fly   356 I---IWVLFEIIDYKILRIRVNSQKLEHLNQKSSVICIKTTCIERILQTFGACCQQGLDPNPVDR 417
            |   :|:|:.::..       ||..:|                                 ||...
Human   674 IGKSVWLLWALVFN-------NSVPIE---------------------------------NPRGT 698

  Fly   418 SVRFLVMTLFLFSLVMYNYYTSSVVGGLLSSSDQGPSTVDEITASPLKISFEDIG---------- 472
            :.:.:|:....|:::....||:::...::  .:|...||..: :....:..|:.|          
Human   699 TSKIMVLVWAFFAVIFLASYTANLAAFMI--QEQYIDTVSGL-SDKKSLHLENTGVAWTAFKTFC 760

  Fly   473 ----------YYKVLFRESQNRSITRLIEKKLSSSRSLN-ELPIFSH--IEDAVPYLKAGGFAFH 524
                      |....|....|.|..|.|.   |:.|.:: .:..|:.  :|||:..||.|.    
Human   761 SDYFQRPQDQYPPFRFGTVPNGSTERNIR---SNYRDMHTHMVKFNQRSVEDALTSLKMGS---- 818

  Fly   525 CEVVDAYPVISE----YFDA---------NEICDLREV-SG-LMEVEILNWILHKNSQYTEIFKT 574
                :|.||..:    .:||         :|.|.|..: || :.........:.|:|.:......
Human   819 ----EAQPVPRKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDL 879

  Fly   575 AMCNAQEKGFVERILRRRQIKKPACQSLYTVYPVSLSGVLPG------------------FVILI 621
            |:......|              ..|.|.||:   |||:...                  |.:|:
Human   880 ALLQFLGDG--------------ETQKLETVW---LSGICQNEKNEVMSSKLDIDNMAGVFYMLL 927

  Fly   622 CGFGASLLLLCLE 634
            ...|.:||:...|
Human   928 VAMGLALLVFAWE 940

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir31aNP_001260346.1 Lig_chan 401..624 CDD:278489 49/278 (18%)
GRIN2CXP_016880033.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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