DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir31a and glr-8

DIOPT Version :10

Sequence 1:NP_001260346.1 Gene:Ir31a / 318912 FlyBaseID:FBgn0051718 Length:648 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:425 Identity:103/425 - (24%)
Similarity:164/425 - (38%) Gaps:73/425 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 ELLGLLRERFNFTVNFRNSRG--WAGRL-GNTTFRLGLLGIVMRNEADIAASGAFNRINRFAEFD 306
            |:|..:.:|.|.|.....:.|  |...| |:.|   |..|.::|.|.|:.|.||....:|....|
 Worm    98 EILKEIGKRLNLTYEILPALGSTWGEYLNGSWT---GAFGQLVRGEVDLLAGGAIMEYDRSVIAD 159

  Fly   307 TIHQSWKFE-TAFLYR----YTSD---LDTHGKSGNFLSPFSDRVWLFCLLTLGAFSIIWVLFEI 363
            ..: .::|| |..:.|    |..|   :.|        .|||..||   ::|.....|..|:|.:
 Worm   160 LTY-PFQFEPTGIMIRSPEKYEDDTLLIVT--------EPFSWEVW---VITAAVILISGVIFLV 212

  Fly   364 IDYKILRIRVNSQKLEHLNQKSSVICIKTTCIERILQTFGACCQQGLDPNPVDRSVRFLVMTLFL 428
            :...|.::      .|.:.         .|..|.|...|....||||...|...|.|.||...:|
 Worm   213 MTNIIRKV------YEEMT---------VTPFESIWVFFSIFVQQGLPEQPRSWSCRVLVALWWL 262

  Fly   429 FSLVMYNYYTSSVVGGLLSSSDQGP-STVDEITASPLKISFEDIGYYKVLFRESQNRSITRLIEK 492
            .|:.:...:|.|:|..........| ..:|::      :.....|.::::..|:.......:...
 Worm   263 ASITLSATFTGSLVALFAVDKTNVPFQNIDQL------VRLVKQGKFEIVMDENSFTRTEMIARS 321

  Fly   493 KLSSSRSLNELPIFSH-------IEDAVPYLKAG-GFAFHCEVVDAYPVISEYFDANEICDLREV 549
            ||...|.|....|.:|       |...|.:::|. |:|.      ..|:.:..|.|...|.:...
 Worm   322 KLPVYRDLWHEMIVNHKVKYVNGIARGVAFVRANPGYAL------LGPMATLNFYAYSDCKVILF 380

  Fly   550 S-GLMEVEILNWILHKNSQYTEIFKTAMCNAQEKGFVERILR--RRQI---KKPACQSLYTVYPV 608
            : |::.| .|:..|.|||.|:..|.|.:....|:||.::.:.  |..:   |...|.|. |:.|.
 Worm   381 NDGILPV-YLSIPLVKNSIYSPYFSTKIREMVERGFTQKWIADYRSYVAMQKINECNST-TIGPK 443

  Fly   609 S---LSGVLPGFVILICGFGASLLLLCLEKVYAHF 640
            |   |......|.:.:.|.|..|.|...|.::..|
 Worm   444 SYLDLKRAQGAFWVFLGGAGLGLALFVGEFIFKFF 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir31aNP_001260346.1 Lig_chan 401..623 CDD:459656 56/239 (23%)
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 88/368 (24%)

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