DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43672 and alsA

DIOPT Version :10

Sequence 1:NP_788912.3 Gene:CG43672 / 318910 FlyBaseID:FBgn0263747 Length:1690 Species:Drosophila melanogaster
Sequence 2:NP_418511.1 Gene:alsA / 948593 ECOCYCID:EG11959 Length:510 Species:Escherichia coli


Alignment Length:256 Identity:63/256 - (24%)
Similarity:117/256 - (45%) Gaps:30/256 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   515 AEALIEFRGVWQKYSNSTYVVQDITLNVYAGEVVALLGHNASGKSTIIKMLYGRTRPKLGEIYLS 579
            |...|...|:.:.: ...:.::.:.|.||.||:.||||.|.:||||::|:|.|...|..|.|.::
E. coli     2 ATPYISMAGIGKSF-GPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITIN 65

  Fly   580 --GFNIVTQRKEALKNSSISMSYKTLFTELVVLDHLVFLSRL---RGLSK----------TEAKL 629
              .:|.:..:..|      .:....::.||.|:|.|..|..|   |.|:|          .|.::
E. coli    66 NISYNKLDHKLAA------QLGIGIIYQELSVIDELTVLENLYIGRHLTKKICGVNIIDWREMRV 124

  Fly   630 EAKALLRYLKLE-DWEKTLVNDLTIGQRRVLQFLCAFAGGNQIVILDKPFDGIDEQRTSLFYSLI 693
            .|..:|..:.|: |.::.:.| |:|..:::|:.........:::|:|:|...:..:.....: ||
E. coli   125 RAAMMLLRVGLKVDLDEKVAN-LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLF-LI 187

  Fly   694 LDQ--KKNRSIFFTSNNQKVASGIADRIFVLSKGKLQAFGTVKKLCRMLNESYRLIIFGNE 752
            ::|  |:..:|.:.|:.......|.||..|:..|.....|.|..:.   |:....::.|.|
E. coli   188 MNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGIVSDVS---NDDIVRLMVGRE 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43672NP_788912.3 rim_protein <266..>732 CDD:130324 58/234 (25%)
ABC_subfamily_A 519..737 CDD:213230 59/235 (25%)
P-loop containing Nucleoside Triphosphate Hydrolases 1330..1517 CDD:476819
alsANP_418511.1 PRK09700 1..510 CDD:182036 63/256 (25%)
Blue background indicates that the domain is not in the aligned region.

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